[AMBER] creating a box of fixed size

From: Bala subramanian <bala.biophysics.gmail.com>
Date: Thu, 26 Apr 2012 11:44:55 +0200

Hi Amber users,
I want to create a box of 40Ang and then place the protein and water inside
the box. Is there any way i can do the same in xleap. While i am aware that
the solvent box can be create with solvateBox command, i am not sure if it
can create a box of fixed size.

Do i need to play with the distance parameter in solvateBox command, so as
to get the box of desired size.

Thanks,
Bala
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Received on Thu Apr 26 2012 - 03:00:06 PDT
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