Re: [AMBER] why no periodic information?

From: Aron Broom <broomsday.gmail.com>
Date: Wed, 18 Apr 2012 15:36:06 -0400

and when you loaded the inpcrd file after first loading the prmtop, did you
load it as "amber coordinates with periodic box"?

On Wed, Apr 18, 2012 at 3:29 PM, Albert <mailmd2011.gmail.com> wrote:

> Dear:
> thank you very much for your reply.
> I do get the information at the bottom of the inprop file :
>
>
> 78.6719840 79.1768040 73.2719700 90.0000000 90.0000000 90.0000000
>
> I also tried to open prmtop first in VMD, and then load inprop file into
> it... what I found is really surprising: there is only one line in the VMD
> view window. Enclosed this email, you can find a screenshot.....
>
> However, I get the atoms number in VMD main window...
>
> thank you very much
>
>
>
>
> On 04/18/2012 09:21 PM, Aron Broom wrote:
>
>> Also, I think you want to open the prmtop first, and then load the inpcrd
>>
>
>
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>


-- 
Aron Broom M.Sc
PhD Student
Department of Chemistry
University of Waterloo
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Received on Wed Apr 18 2012 - 13:00:03 PDT
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