[AMBER] sander error during GB calculations

From: Qiong Zhang <qiong.zhang.qzh.gmail.com>
Date: Mon, 16 Apr 2012 22:09:28 -0400

Hi all,

I came across a problem when doing MMGBSA calculations with per-residue
decomposition, which requires sander. It works well for MMGBSA without

Beginning GB calculations with sander...
  calculating complex contribution...
/lap/amber/11.0.17_AT1.5/bin/sander: symbol lookup error:
/lap/amber/11.0.17_AT1.5/bin/sander: undefined symbol: __intel_ssse3_memcpy
Error: sander error during GB calculations!

I think it has something to do with the intel compilers. But I do not know
how to solve the problem. Could you please give me some suggestions? Thanks!


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Received on Mon Apr 16 2012 - 19:30:03 PDT
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