Re: [AMBER] on the protonation of the HIS, etc

From: Marc van der Kamp <marcvanderkamp.gmail.com>
Date: Thu, 5 Apr 2012 12:14:37 +0100

HIS protonation states: HIE, HID, HIP. HIS defaults to HIE.
Cys-SH: CYS
Cys-S-S: CYX

You can see this in, for example, $AMBERHOME/dat/leap/lib/amino10.lib

--Marc

On 5 April 2012 12:08, Acoot Brett <acootbrett.yahoo.com> wrote:

> Dear All,
>
> For the different protonation state of HIS, what are there 3-letter code
> for AMBER? And how about -SH and -S-S- codon? Or do you have a web link for
> me to read?
>
> I am looking forward to getting a reply from you.
>
> Cheers,
>
> Acoot
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Received on Thu Apr 05 2012 - 04:30:05 PDT
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