Re: [AMBER] a question related to force field

From: FyD <fyd.q4md-forcefieldtools.org>
Date: Mon, 02 Apr 2012 07:24:37 +0200

Dear Acoot,

> Will you please tell me how Amber forcefields treat the N-termijnal
> and C-terminal residues?

You might read tutorials at q4md-forcefieldtools.org; you will find
how they are constructed:
http://q4md-forcefieldtools.org/Tutorial/Tutorial-3.php#16
http://q4md-forcefieldtools.org/Tutorial/Tutorial-3.php#17
  versus
http://q4md-forcefieldtools.org/Tutorial/Tutorial-3.php#15

and finally:
http://q4md-forcefieldtools.org/Tutorial/Tutorial-3.php#25
  versus
http://q4md-forcefieldtools.org/Tutorial/Tutorial-3.php#24

regards, Francois



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Received on Sun Apr 01 2012 - 22:30:03 PDT