[AMBER] angle restraint

From: Elisa Frezza <elisa.frezza.gmail.com>
Date: Tue, 27 Mar 2012 11:28:46 +0200

Dear All

I would like to do umbrella sampling and to obtain 2D-PMF using distance
and angle restraints.
The system under investigation is a pair of dodecamers and I would like to
restrain the relative twist angle between the two duplexes.
I would like to ask you if it is possible to do this and if I can define
and use the center of mass for angle restraints.

Thank you in advance


Elisa Frezza
Ph.D. Student in Materials Science and Engineering
Dipartimento di Scienze Chimiche
UniversitÓ di Padova
via Marzolo, 1
35131 Padova - Italy
Phone: +39 049 827 5149
Skype: elisa.frezza
Emai: elisa.frezza.gmail.com
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Received on Tue Mar 27 2012 - 02:30:03 PDT
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