Re: [AMBER] Amber10 parallel installation test example run error

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Thu, 15 Mar 2012 06:16:25 -0400

Hi,

Do you have csh or tcsh installed? The tests require c shell.

-Dan

On Mar 14, 2012, at 11:50 PM, Shaandar Nyamtulga <nyam100.hotmail.com> wrote:

>
> Hi
> I have installed Amber10 parallel successfully.Then I tried to run example on the user manual the following way and it gives the following error.
>
>
> mpiu.slave1:~/amber11/test$ export DO_PARALLEL='mpiexec -np 2 -f /mirror/mpd.hosts'
>
> sudo make test.parallel.MM < /dev/null
>
> export AMBERHOME=/mirror/amber11/
> cd rem_gb_2rep && ./Run.rem
> set: Syntax Error.
> make: *** [test.sander.REM] Error 1
> mpiu.slave1:~/amber11/test$ sudo make test.parallel.MM < /dev/null
> export AMBERHOME=/mirror/amber11/
> cd rem_gb_2rep && ./Run.rem
> set: Syntax Error.
> make: *** [test.sander.REM] Error 1
>
>
> I included
> export AMBERHOME=/mirror/amber11/
> in several places in Makefile because it did not recognise the environment variable.
>
> Other parallel programs are working fine on my Beowulf cluster .
>
> Thank you
>
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Received on Thu Mar 15 2012 - 03:30:03 PDT
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