[AMBER] Amber10 parallel installation test example run error

From: Shaandar Nyamtulga <nyam100.hotmail.com>
Date: Thu, 15 Mar 2012 03:50:37 +0000

Hi
I have installed Amber10 parallel successfully.Then I tried to run example on the user manual the following way and it gives the following error.


mpiu.slave1:~/amber11/test$ export DO_PARALLEL='mpiexec -np 2 -f /mirror/mpd.hosts'

sudo make test.parallel.MM < /dev/null

export AMBERHOME=/mirror/amber11/
cd rem_gb_2rep && ./Run.rem
set: Syntax Error.
make: *** [test.sander.REM] Error 1
mpiu.slave1:~/amber11/test$ sudo make test.parallel.MM < /dev/null
export AMBERHOME=/mirror/amber11/
cd rem_gb_2rep && ./Run.rem
set: Syntax Error.
make: *** [test.sander.REM] Error 1


I included
export AMBERHOME=/mirror/amber11/
in several places in Makefile because it did not recognise the environment variable.

Other parallel programs are working fine on my Beowulf cluster .

Thank you
                                               
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Received on Wed Mar 14 2012 - 21:00:02 PDT
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