[AMBER] Preparation of the topology file by means of Antechamber

From: James Starlight <jmsstarlight.gmail.com>
Date: Sun, 29 Jan 2012 09:12:21 -0800

Dear Amber Users!


I want to prepare my PDB wich contain some non-standart residues for
the simulation in the GROMACS in Amber99 force field.

I've found that Antechamber software wich is prt of amber tools would
be best way to prepart .ITP topology file suitable for the Gromacs
simulation.

Could you tell me where I could find some tutorial about such topology
preparation ?

Thanks,

James

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Received on Sun Jan 29 2012 - 09:30:03 PST
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