Re: [AMBER] Amber Tools 1.5 installation

From: Matthew D Antalek <mantale1.binghamton.edu>
Date: Wed, 19 Oct 2011 08:05:10 -0400

Hi all,

   Sorry for not getting back earlier, AT 1.5 installed correctly thanks to
a "make clean" before remcompiling.

-Matt

On Tue, Oct 18, 2011 at 11:12 PM, Matthew D Antalek <mantale1.binghamton.edu
> wrote:

> Thanks, I think the bugfix took care of some of the problems, but now
> different errors.
>
> ShapeWidg.c:27:34: fatal error: X11/extensions/shape.h: No such file or
> directory
> compilation terminated.
> make[3]: *** [ShapeWidg.o] Error 1
> make[3]: Leaving directory
> `/home/matthew/amber11/AmberTools/src/leap/src/Xmu'
> make[2]: *** [install_xleap] Error 2
> make[2]: Leaving directory `/home/matthew/amber11/AmberTools/src/leap'
> make[1]: *** [install] Error 2
> make[1]: Leaving directory `/home/matthew/amber11/AmberTools/src/leap'
>
> make: *** [serial] Error 2
>
>
> It seems that I'm missing some X11 development package? Any ideas as to
> what package I need? I'll keep looking in the meantime...
>
> -Matt
>
>
>
> On Tue, Oct 18, 2011 at 10:26 PM, David A. Case <case.biomaps.rutgers.edu>wrote:
>
>> On Tue, Oct 18, 2011, Matthew D Antalek wrote:
>> >
>> > I'm using Fedora 15, with the bash shell (the echo $SHELL returns
>> > /bin/bash). The configuration goes fine, but when I type "make install"
>> it
>> > runs for a short time and I get the output:
>> >
>> >
>> >
>> > Warning: Type mismatch in argument 'jtr' at (1); passed REAL(8) to
>> > INTEGER(4)
>> > _amg1r5.f:1217.58:
>>
>> My guess is that you have not applied bugfix.8 for AmberTools. Best
>> practice,
>> of course, is to use the bugfix.all script to apply all of the updates.
>>
>> ...good luck...dac
>>
>>
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>>
>
>
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Received on Wed Oct 19 2011 - 05:30:06 PDT
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