Also, like Dave said before, use the "tleap" and "xleap" executables, NOT
xaLeap and teLeap.
The tutorials are useful sources of information when you're just beginning
to use Amber (though some knowledge of the command-line is required before
you start).
http://ambermd.org/tutorials/
HTH,
Jason
On Tue, Oct 18, 2011 at 8:08 AM, David A Case <case.biomaps.rutgers.edu>wrote:
> On Tue, Oct 18, 2011, Dr. Alaa El-Din A. Abdel-Gawad wrote:
> >
> > The all installed programs are in the folder called bin. When I click
> > teleap I get a window for calculation. For Xeleap or sleap, I got a
> > snapshot and a massage contains "open stackdump file" and the following
> > code nimbers
> >
> > for antechamber, click antechamber icon recall nothing. please, what I
> > have missed?
>
> You are not supposed to use the mouse to start any of these programs; the
> codes are designed to be run from a terminal (shell), by typing the name of
> the commands (along with other arguments) on the command line.
>
> ...good luck....dac
>
>
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Tue Oct 18 2011 - 07:00:02 PDT
