[AMBER] XH/pi (X=C, O, N) interactions and stacking interactions in AMBER

From: Rajesh Raju <rajesh.raju.mail.chem.tamu.edu>
Date: Thu, 22 Sep 2011 18:24:39 -0500

Dear AMBER users,

I am just curios about to know how AMBER treats CH/pi, OH/pi NH/pi
type of interactions and stacking interactions. Does the van der wall
interatcion terms are sufficient enough to model stacking ch/pi and
stacking interactions as the major compent of this interactions are
dispersion forces..

Any explanations or suggestion appreciate


Rajesh


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Received on Thu Sep 22 2011 - 16:30:03 PDT