We have developed a fast and accurate new GPU based SASA calculation method. It can bring information about SASA per atom and also grid per atom necessary to graphically render the molecular surface. We would like to know in Amber:
a) where could we find information about the SASA method it uses so we can test speed and accuracy increment with our method
b) same question for the method Amber uses to graphically render the molecular surface
Thanks in advance,
Horacio
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Received on Wed Sep 21 2011 - 10:00:02 PDT
