Dear Sir,
I am planning to trace two plane's dihedral angle change with a few nano seconds' trajectory. To calculate two planes' dihedral angle, at least six atoms' coordinates are necessary. I have referred to amber tutorial and just found that only torsion angle based on 4 atoms could be utilised.
can anybody help
thanks a lot
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Received on Mon Aug 29 2011 - 20:00:04 PDT