I do not have Amber 11, so I am unable to do that.
On Fri, Aug 26, 2011 at 11:01 AM, Ben Roberts <ben.roberts.geek.nz> wrote:
> Hi Hashem,
>
> On 26/8/2011, at 10:57 a.m., Hashem Taha wrote:
>
> > I am trying to parameterize a bimetallic Cd2+ using MCPB. I have obtained
> > all the required parameters for my system (these are attached). I am
> trying
> > to minimize the system but I am running into many problems.
>
> If you have Amber 11, are you able to produce a trajectory during your
> minimisation? That may help to show whether, for example, atoms are flying
> apart.
>
> Regards,
> Ben
>
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Received on Fri Aug 26 2011 - 08:30:03 PDT
