Ross,
Sorry, I meant to say ... does NOT have ... So, yes, Farid was
correct. I had to patch AmberTools as recommended.
On Thu, Aug 25, 2011 at 10:19 PM, Ross Walker <ross.rosswalker.co.uk> wrote:
>> I agree, my bugfixes from about a month ago does have all the patches
>> needed. I checked both files.
>
> This CANNOT possibly be true since the latest patches, including the
> bugfix.13 required for AMBERTools 1.5, were not released a month ago. It is
> critical that you apply both the AMBER 11 bugfixes and the AMBERTools 1.5
> bugfix.13 in order to be able to build and run the new cuda code. If you do
> not you will see the exact CUDA_RAND errors that you reported since the
> configure script in $AMBERHOME/AmberTools/src/configure needs to be updated
> as part of the latest GPU update and this file belongs to AmberTools.
>
> All the best
> Ross
>
>
> /\
> \/
> |\oss Walker
>
> ---------------------------------------------------------
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Adjunct Assistant Professor |
> | Dept. of Chemistry and Biochemistry |
> | University of California San Diego |
> | NVIDIA Fellow |
> | http://www.rosswalker.co.uk | http://www.wmd-lab.org/ |
> | Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
> ---------------------------------------------------------
>
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--
Carlos P Sosa, Ph.D.
Biomedical Informatics and Computational Biology (BICB) Consultant
Minnesota Supercomputing Institute
for Advanced Computational Research
University of Minnesota
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Received on Thu Aug 25 2011 - 21:30:03 PDT
