[AMBER] Sander Compilation Problem

From: Ali Faruqi <alifar76.gmail.com>
Date: Wed, 29 Jun 2011 11:51:14 +0500

With reference to my previous post regarding the compilation AmberTools, I
am now facing a problem installing Amber10. I have been able to successfully
install AmberTools. However, when I try to compile Amber10, I get the
following error:

su-sander-proxy.o ncsu-smd-hooks.o ncsu-umbrella.o ncsu-utils.o ncsu-value.o
                ../lapack/lapack.a ../blas/blas.a \
                ../lib/nxtsec.o ../lib/sys.a ../netcdf/lib/libnetcdf.a
gfortran: ../lapack/lapack.a: No such file or directory
gfortran: ../blas/blas.a: No such file or directory
make[1]: *** [sander] Error 1
make[1]: Leaving directory `/home/AMBER-backup/Amber-10/amber10/src/sander'
make: *** [serial] Error 2

I issue the 'make serial' command for this purpose. Prior to that, I
generated the config.h file using the following command:

'./configure_amber -static gfortran'

I do not use the './configure_amber -static g95' command as instructed in
the installation manual because when I use the g95 command, I get the
following error:

Configuring netcdf; (may be time-consuming)
configure: WARNING: No F90 compiler found. F90 API will not be built.
configure: error: Could not link conftestf.o and conftest.o
netcdf configure returned 1
NETCDF configure failed! Check the netcdf_config.log file

What should I do? Please inform me. Thank you very much.

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Received on Wed Jun 29 2011 - 00:00:04 PDT
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