Hi,
I don't see this error using the same system setup (intel 11, MKL 10
etc). It looks like you may have tried to apply bugfix 1 multiple
times. The patch program should detect previously applied patches but
it is not always successful. I am attaching a clean AT1.5 version of
Frame.cpp (patched); try replacing
$AMBERHOME/AmberTools/src/cpptraj/src/Frame.cpp with this one and see
if compilation works. Alternatively, you can start from a clean
codebase.
-Dan
On Fri, May 20, 2011 at 10:56 AM, Vlad Cojocaru
<vlad.cojocaru.mpi-muenster.mpg.de> wrote:
> I should probably add that I used MKL 10.2, the Linux OS, kernel 2.6.32
> Also, amber tools 1.4 compiles without problems in the same environment.
>
> The problems appear to be in the new code of cppptraj
>
> Vlad
>
> On 05/20/2011 03:35 PM, Vlad Cojocaru wrote:
>> Dear Ambers,
>>
>> I am trying to compile amber tools 1.5 with the intel compiler
>> (11.1.059) on a x86_64 platform.
>> However, I am getting the errors attached.
>>
>> The compilation works fine with gcc 4.3.4
>>
>> Any ideas about potential problems would be appreciated
>>
>> Regards
>> Vlad
>>
>>
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>
> --
> Dr. Vlad Cojocaru
> Max Planck Institute for Molecular Biomedicine
> Department of Cellular and Developmental Biology
> Roentgenstrasse 20
> 48149 Muenster, Germany
> tel: +49-251-70365-324
> fax: +49-251-70365-399
> email: vlad.cojocaru[at]mpi-muenster.mpg.de
>
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Fri May 20 2011 - 13:00:02 PDT
