dear sir,
thank you for your concern.
it shows like this:
[root.localhost ~]# $AMBERHOME/exe/antechamber -i sustiva.pdb -fi pdb -o sustiva.prepin -fo prepi -c bcc -s 2
Running: /usr/local/amber9/exe/bondtype -i ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac -j full
Running: /usr/local/amber9/exe/atomtype -i ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC -p gaff
Total number of electrons: 160; net charge: 0
Running: $AMBERHOME/exe/divcon
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
divcon 08336186 Unknown Unknown Unknown
divcon 081F4BE0 Unknown Unknown Unknown
divcon 081BE548 Unknown Unknown Unknown
Error: cannot run "$AMBERHOME/exe/divcon" of bcc() in charge.c properly, exit
regards,
Souvik Sur
Ph. D. Student
Department Of Chemistry
University Of Delhi
India
> From: ross.rosswalker.co.uk
> To: amber.ambermd.org
> Date: Mon, 2 May 2011 01:42:51 -0700
> Subject: Re: [AMBER] Antechamber Problem
>
> > I have a problem related to antechamber, I am using AMBER9
> > but when I run the command :$AMBERHOME/exe/antechamber -i sustiva.pdb
> > - fi pdb -o sustiva.prepin
> > -fo prepi -c
> > bcc -s 2
> >
> > It shows error,please suggest me what was the problem and
> > how can I run antechamber in my system.
>
> What is the error message?
>
>
>
>
>
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Received on Mon May 02 2011 - 02:30:02 PDT
