Ah, yes. If you were using "sudo make install" without using "sudo -e",
then the environment is not inherited and the root shell doesn't see
AMBERHOME.
If it makes any difference, I don't see those warnings with gcc44 installed
via MacPorts, and gcc45 doesn't produce faster binaries (I've tested both).
All the best,
Jason
On Mon, Apr 25, 2011 at 6:44 PM, Dean Cuebas
<deancuebas.missouristate.edu>wrote:
> Thank you Jason and Mengjuei for your quick responses.
>
> And yes, I used Macports to install gcc45
>
> For those trying this, I had to add read/write permissions on my /opt
> folder and it's contents for me, or else things got messy.
>
> Thanks,
> Dean--
> Dr. Dean Cuebas, Associate Prof of Chemistry
> deancuebas.missouristate.edu, Ph 417-836-8567 FAX 417-836-5507
> Dept. of Chemistry, Missouri State University
> Springfield, Missouri 65897
>
> On 4/25/11 1:55 AM, "Mengjuei Hsieh" <mjhsieh.gmail.com> wrote:
>
> >Hi,
> >
> >Don't worry, that's some harmless (so far) warning of nab with newer gcc.
> >
> >Cheers,
> >--
> >Mengjuei
> >
> >On Sun, Apr 24, 2011 at 9:13 PM, Dean Cuebas
> ><deancuebas.missouristate.edu> wrote:
> >> ld: warning: alignment lost in merging tentative definition _tconjgrad
> >> .
> >>
> >> .
> >> .
> >> diffing ltest.out.check with ltest.out
> >> PASSED
> >> Just want to know if these are things to worry about.
> >> Thanks!!!
> >
> >_______________________________________________
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> >AMBER.ambermd.org
> >http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
> _______________________________________________
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Mon Apr 25 2011 - 22:30:06 PDT
