Hello AMBER,
I was trying to compile AMBER on keeneland.
Most steps weer successful with intel/2011.3.174 compiler by adding
"-shared-intel" on NDFLAGS.
I got an error when running make cuda_parallel after -mpi -cuda intel
flags on 'configure' step.
------------------------------------------------------
gputypes.h(995): error: identifier "MPI_Win" is undefined
1 error detected in the compilation of
"/tmp/tmpxft_00000e4d_00000000-6_kForcesUpdate.compute_20.cpp1.ii".
make[3]: *** [kForcesUpdate.o] Error 2
make[3]: Leaving directory
`/nics/d/home/bkim/packages/amber11/src/pmemd/src/cuda'
make[2]: *** [-L/sw/keeneland/cuda/3.2/linux_binary/lib64] Error 2
make[2]: Leaving directory `/nics/d/home/bkim/packages/amber11/src/pmemd/src'
make[1]: *** [cuda_parallel] Error 2
make[1]: Leaving directory `/nics/d/home/bkim/packages/amber11/src/pmemd'
make: *** [cuda_parallel] Error 2
-----------------------------------------------------
I'm using following modules:
Currently Loaded Modulefiles:
1) modules 5) mkl/2011.3.174 9) limic2/0.5.4
2) torque/2.4.8 6) intel/2011.3.174 10) mvapich2/1.6rc2
3) moab/5.4.0.s16449 7) PE-intel
4) gold 8) cuda/3.2
How do I solve this compilation error referring to MPI_Win?
Thank you.
Bongkeun Kim
bkim at chem.ucsb.edu
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Apr 14 2011 - 13:30:03 PDT
