Hi
This is a bug that Dan Roe has fixed already. I am not sure if there is
a bugfix for this.
The intermediate solution is to do what Jason mentioned, to create a
single netcdf or mdcrd file and get pdbs from there.
Adrian
On 4/11/11 8:01 PM, moitrayee.mbu.iisc.ernet.in wrote:
>> On Mon, Apr 11, 2011 at 10:03 AM,<moitrayee.mbu.iisc.ernet.in> wrote:
>>
>>> Dear Jason,
>
>> Thus, the 10 frames you see are just from the last trajectory you read in. If
> this is true (a ptraj expert would have to confirm), then the way to do what you
> want to do is run it in 2 steps. First, combine all of the
> trajectories/snapshots into a single trajectory, then in a separate step,
> extract the PDBs.
>>
> I thinks this exactly what is happening here. So do you think I should make a
> single netcdf file out of the trajectories and then run trajout.
>
>
> Thanks a lot.
>
> Moitrayee
>
>
>
>
>
>
>
--
Dr. Adrian E. Roitberg
Associate Professor
Quantum Theory Project, Department of Chemistry
University of Florida
on Sabbatical in Barcelona until August 2011.
Email roitberg.ufl.edu
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Received on Mon Apr 11 2011 - 11:30:04 PDT
