> On Mon, Apr 11, 2011 at 10:03 AM, <moitrayee.mbu.iisc.ernet.in> wrote:
>
>> Dear Jason,
> Thus, the 10 frames you see are just from the last trajectory you read in. If
this is true (a ptraj expert would have to confirm), then the way to do what you
want to do is run it in 2 steps. First, combine all of the
trajectories/snapshots into a single trajectory, then in a separate step,
extract the PDBs.
>
I thinks this exactly what is happening here. So do you think I should make a
single netcdf file out of the trajectories and then run trajout.
Thanks a lot.
Moitrayee
--
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Apr 11 2011 - 11:30:03 PDT
