[AMBER] What is the unit for RMSF result?

From: Catein Catherine <askamber23.hotmail.com>
Date: Tue, 22 Feb 2011 14:37:00 +0800

Dear Sir/Madam,
What is the unit of the RMSF values obtained with the following command?
"atomicfluct out xxx.bfactor byres bfactor"
"atomicfluct out xxx.nobfactor .CA,C1',N10 byres"
The first one ranged from 550 to 5
The second one ranged from 4 to 0.4
Which one should be used for publication?
Do we need to do the rms first out xxx.rms .CA,C1',N10 before doing RMSF calculation?
Thanks a lot.

Best regards,
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Received on Mon Feb 21 2011 - 23:00:02 PST
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