[AMBER] R: Re: V5 dihedrals

From: <serena_leone.libero.it>
Date: Wed, 16 Feb 2011 19:29:00 +0100 (CET)

Dear prof. Case,

thank you for your answer. Is this valid for sander in both Amber10 and
Amber11 or just in the latter version?

Thank you again,

>----Messaggio originale----
>Da: case.biomaps.rutgers.edu
>Data: 16/02/2011 18.14
>A: "serena_leone.libero.it"<serena_leone.libero.it>, "AMBER Mailing List"
>Ogg: Re: [AMBER] V5 dihedrals
>On Wed, Feb 16, 2011, serena_leone.libero.it wrote:
>> I would like to know if Sander in Amber10 or Amber11 can handle dihedral
>> potentials described with additional coefficients in a frcmod file (i.e.,
>> besides V1, V2, V3 and V4).
>As far as I can see, there is no problem with sander (or with pmemd). The
>nmode and nab codes need an update, which we are working on.

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