Dear All
I have two trajectories of MD simulation related to wild type and mutant form of my ligand in the complex of receptor-ligand. I would like to compare the RMSD of pairwise structures but I have not found any option in VMD in order to do that. How can I compare the RMSD of two seperate trajectories.
Any help would be appreciated.
Cheers,
Maryam
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Received on Wed Dec 22 2010 - 05:00:04 PST
