Dear Amber developers and users
I am Ikuo Kurisaki, a post doctoral fellow in Japan.
I would like to ask whether the Tin-foil boundary condition is employed by default when Particle Mesh Ewald is used for net-charged system (e.g. Na+ and water molecules).
I cannot the answer in the Amber manual but according to previous discussion in this mailing-list,
http://archive.ambermd.org/200504/0329.html
http://archive.ambermd.org/200712/0223.html
it seems that Tin-foil boundary condition is employed.
Best Regard,
Ikuo Kurisaki
ps:
We are using Amber9 or later versions.
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E-mail: kurisaki.fc.ritsumei.ac.jp
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Received on Wed Dec 08 2010 - 21:00:06 PST