Hello,
Here is the last thread that had a similar problem to yours. Colvin fixed
the problem by rolling back to 11.1.069 (You are currently at 11.1.073 it
appears).
http://archive.ambermd.org/201009/0307.html
Hope this helps,
Jason
On Thu, Sep 23, 2010 at 9:33 AM, case <case.biomaps.rutgers.edu> wrote:
> On Thu, Sep 23, 2010, Shradha Chopra Phd2009,BIC wrote:
> >
> > I am trying to install Amber 11 along with AmberTools 1.4 but make
> install
> > for amber tools fails. I am using an intel 64-bit machine.
> >
> > ld: pbsa: hidden symbol `__intel_cpu_indicator_init' in
> > /data/shradha/intel/Compiler/11.1/073/lib/intel64/libirc.a(cpu_disp.o) is
> > referenced by DSO
> > ld: final link failed: Nonrepresentable section on output
>
> As Jason said, this is probably a compiler problem. What is the output of
> "ifort -V" and "icc -V"? Are they both at the same release level?
>
> The latest compiler that works here is 11.1.069, so it would be a little
> odd if such a minor change was really the culprit. Is there any chance
> you tried to build with some other compiler, and might have some left over
> object files? If so, be sure to type "make clean", and then re-run the
> configure script.
>
> These types of errors pop up from time to time, and it's usually a bit of a
> mystery what is going on: the missing item (__intel_cpu_indicator_init) is
> code coming from the compiler, not something that Amber developers coded.
>
> ...good luck....dac
>
>
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Thu Sep 23 2010 - 07:00:16 PDT
