Dear Sir/Madam,
I would like to include parmbsc0 for a protien DNA complex calculation.
I tried to startup xleap using the following command:
$AMBERHOME/exe/xleap -s -f $AMBERHOME/dat/leap/cmd/leaprc.ff99SB
>source leaprc.gaff
What can I do to include parmbsc0 force field for DNA parameters?
If I call up the parmbsc0 force field parameters, will the parameters used for protein be still same as ff99SB?
Best regards,
Cat.
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Received on Sat Aug 14 2010 - 21:00:03 PDT
