Re: [AMBER] question about bond command

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Thu, 22 Jul 2010 11:54:31 -0700

> > do I have to do in tleap: bond pdbname.REA.N75 pdbname.REB.C2
> Sounds right - won't cost you to try it.

You may need to give residue numbers instead of names.
Logically this would be required if there is more than
one of each residue type - bond will not find all
instances and generate multi-way crosslinkage.

There are probably examples of 'bond' in the tutorials.


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Received on Thu Jul 22 2010 - 12:00:05 PDT
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