> concerning connect command: my residu connects to others using 5 atoms.
> I never used connect command, is this to define head and tail?
You would use the 'set' command I believe, to set connectX atoms
and head=connect0 and tail=connect1. This would be when defining
your residues before saveoff. Then after loadpdb you would use
the bond cmd to join the relevant atoms defined with connectX
property (X in {0, 1, 2, ...}).
See the tutorials for details.
Bill
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Received on Thu Jul 22 2010 - 13:00:04 PDT
