Re: [AMBER] question about bond command

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Thu, 22 Jul 2010 11:50:28 -0700

> do I have to do in tleap: bond pdbname.REA.N75 pdbname.REB.C2

Sounds right - won't cost you to try it.

Technically if your residue connects to others using more than 2
atoms, you should also set connect2, connect3 etc. as needed
when defining the residue. Not sure what happens if you bond
without doing this.

Bill

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Received on Thu Jul 22 2010 - 12:00:04 PDT
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