It looks like you need a more recent version of Python. You need version 2.6
or later for MMPBSA.py.
-Bill
On Wed, Jun 23, 2010 at 12:48 PM, Oliver Grant <olivercgrant.gmail.com>wrote:
> Hi all,
>
> I am getting this error after reinstalling nab in serial (fixed another
> problem I was having)
>
> I typed Make install and got this:
>
> ]$ make install
> /bin/bash setup.sh
> Python version 2 detected. No file conversion necessary.
> /bin/cp MMPBSA.py *pyc /array2/programs/amber11_20100607/bin
> /array2/programs/amber11_20100607/bin/nab -o mmpbsa_py_nabnmode
> mmpbsa_entropy.nab
> /bin/mv mmpbsa_py_nabnmode /array2/programs/amber11_20100607/bin
>
> and then tried to run the script.
>
> $ MMPBSA.py
> Traceback (most recent call last):
> File "/array2/programs/amber11_20100607/exe/MMPBSA.py", line 629, in ?
> utils.gbmdin(INPUT) # create our own
> File "/array2/programs/amber11_20100607/bin/utils.py", line 329, in gbmdin
> mdin.write(
> AttributeError: 'str' object has no attribute 'format'
>
> Any Ideas?
>
> Thanks,
>
> Oliver
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Bill Miller III
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-6715
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Received on Wed Jun 23 2010 - 10:00:12 PDT
