[AMBER] dna from Kevin Hauser on 2010-06-23 (Amber Archive Jun 2010)

From: Kevin Hauser <84hauser.gmail.com>
Date: Wed, 23 Jun 2010 08:45:29 -0400

Hi, Monica,

For future questions along the lines of yours, I have pasted the "all_nuc94"
file contained within the AMBER11 leap libraries (which ought to be same in
AMBER9), along with the PDB ATOM file formats at the bottom of this note. "
all_nuc94.in" contains the names of atoms for the various types of nucleic
acids one may use. The list may not be exhaustive (others, chime in if am
wrong; but for certain nucleic like 8oxoGuanine, I know parameters must be
built from 'scratch', but i digress). The PDB ATOM file format information
can be found at (http://deposit.rcsb.org/adit/docs/pdb_atom_format.html). I
used the information from the website, and make no claim to have authored
it.

Two things were immediately peculiar: One you didn't label 5' and 3' ends of
your molecule, nor did you separate them with a "TER" line. Was it your
intention to build one long strand of DNA?

Attaching the leap.log would be helpful, but I think I spotted a could-be
problem:

your atom names "H2'2", and H5'1" were not properly aligned in the columns.
To fix it use vim's search and replace command:

Once in vim, type -->
":%s/ H2'2/H2'2 /gc"
to move all occurrences one space to left. gc will prompt you for y or n
response to change each occurrence...
":%s/ H5'1/H5'1 /gc"
will do same...

If for whatever reason this vim thing doesn't work, then there are many
other ways to edit the oligo.pdb file....

HTH,
kevin

FOR FUTURE REFERENCE:
~~~~~~~~~~~~~~~~~~~~~

---------------------------------------
PDB ATOM FILE FORMAT
---------------------------------------

COLUMNS DATA TYPE CONTENTS
--------------------------------------------------------------------------------
1 - 6 Record name "ATOM "

7 - 11 Integer Atom serial number.

13 - 16 Atom Atom name.

17 Character Alternate location indicator.

18 - 20 Residue name Residue name.

22 Character Chain identifier.

23 - 26 Integer Residue sequence number.

27 AChar Code for insertion of residues.

31 - 38 Real(8.3) Orthogonal coordinates for X in
Angstroms.

39 - 46 Real(8.3) Orthogonal coordinates for Y in
Angstroms.

47 - 54 Real(8.3) Orthogonal coordinates for Z in
Angstroms.

55 - 60 Real(6.2) Occupancy.

61 - 66 Real(6.2) Temperature factor (Default = 0.0).

73 - 76 LString(4) Segment identifier, left-justified.

77 - 78 LString(2) Element symbol, right-justified.

79 - 80 LString(2) Charge on the atom.

--------------------------
all_nuc94.in
------------------------

!!index array str
"DA"
"DA3"
"DA5"
"DAN"
"DC"

"DC3"
"DC5"
"DCN"
"DG"
"DG3"
"DG5"
"DGN"
"DT"
"DT3"
"DT5"
"DTN"
"RA"

"RA3"
"RA5"
"RAN"
"RC"
"RC3"
"RC5"
"RCN"
"RG"
"RG3"
"RG5"
"RGN"
"RU"

"RU3"
"RU5"
"RUN"
!entry.DA.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.165900

"O1P" "O2" 0 1 131072 2 8 -0.776100
"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400
"C5'" "CT" 0 1 131072 5 6 -0.006900

"H5'1" "H1" 0 1 131072 6 1 0.075400
"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900
"H4'" "H1" 0 1 131072 9 1 0.117600

"O4'" "OS" 0 1 131072 10 8 -0.369100
"C1'" "CT" 0 1 131072 11 6 0.043100
"H1'" "H2" 0 1 131072 12 1 0.183800
"N9" "N*" 0 1 131072 13 7 -0.026800

"C8" "CK" 0 1 131072 14 6 0.160700
"H8" "H5" 0 1 131072 15 1 0.187700
"N7" "NB" 0 1 131072 16 7 -0.617500
"C5" "CB" 0 1 131072 17 6 0.072500

"C6" "CA" 0 1 131072 18 6 0.689700
"N6" "N2" 0 1 131072 19 7 -0.912300
"H61" "H" 0 1 131072 20 1 0.416700
"H62" "H" 0 1 131072 21 1 0.416700

"N1" "NC" 0 1 131072 22 7 -0.762400
"C2" "CQ" 0 1 131072 23 6 0.571600
"H2" "H5" 0 1 131072 24 1 0.059800
"N3" "NC" 0 1 131072 25 7 -0.741700

"C4" "CB" 0 1 131072 26 6 0.380000
"C3'" "CT" 0 1 131072 27 6 0.071300
"H3'" "H1" 0 1 131072 28 1 0.098500
"C2'" "CT" 0 1 131072 29 6 -0.085400

"H2'1" "HC" 0 1 131072 30 1 0.071800
"H2'2" "HC" 0 1 131072 31 1 0.071800
"O3'" "OS" 0 1 131072 32 8 -0.523200
!entry.DA.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0
"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0

"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OS" 0 -1 0.0

!entry.DA.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA.unit.childsequence single int
2
!entry.DA.unit.connect array int
1
32
!entry.DA.unit.connectivity table int atom1x int atom2x int flags

1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1
10 11 1
11 12 1
11 13 1
11 29 1
13 14 1
13 26 1
14 15 1
14 16 1
16 17 1
17 18 1

17 26 1
18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
23 25 1
25 26 1
27 28 1
27 29 1
27 32 1
29 30 1
29 31 1
!entry.DA.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
!entry.DA.unit.name single str
"DA"
!entry.DA.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549

3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231

4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538887 -0.297039 3.315663
4.336753 -0.846471 2.077048
4.152405 -0.207228 1.226292
4.452865 -2.140973 2.049081
4.754063 -2.480044 3.363010

4.998001 -3.708197 3.989216
4.976786 -4.883494 3.345922
5.160722 -5.738815 3.850595
4.776859 -4.914033 2.356379
5.265303 -3.689337 5.302150
5.284983 -2.519871 5.935286
5.498276 -2.482153 6.993342

5.072691 -1.308506 5.455779
4.806144 -1.356352 4.133219
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279

!entry.DA.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 32 0 0 0 0
!entry.DA.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DA" 1 33 1 "n" 0

!entry.DA.unit.residuesPdbSequenceNumber array int
0
!entry.DA.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.DA3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100

"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400
"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400

"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900
"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100

"C1'" "CT" 0 1 131072 11 6 0.043100
"H1'" "H2" 0 1 131072 12 1 0.183800
"N9" "N*" 0 1 131072 13 7 -0.026800
"C8" "CK" 0 1 131072 14 6 0.160700

"H8" "H5" 0 1 131072 15 1 0.187700
"N7" "NB" 0 1 131072 16 7 -0.617500
"C5" "CB" 0 1 131072 17 6 0.072500
"C6" "CA" 0 1 131072 18 6 0.689700

"N6" "N2" 0 1 131072 19 7 -0.912300
"H61" "H" 0 1 131072 20 1 0.416700
"H62" "H" 0 1 131072 21 1 0.416700
"N1" "NC" 0 1 131072 22 7 -0.762400

"C2" "CQ" 0 1 131072 23 6 0.571600
"H2" "H5" 0 1 131072 24 1 0.059800
"N3" "NC" 0 1 131072 25 7 -0.741700
"C4" "CB" 0 1 131072 26 6 0.380000

"C3'" "CT" 0 1 131072 27 6 0.071300
"H3'" "H1" 0 1 131072 28 1 0.098500
"C2'" "CT" 0 1 131072 29 6 -0.085400
"H2'1" "HC" 0 1 131072 30 1 0.071800

"H2'2" "HC" 0 1 131072 31 1 0.071800
"O3'" "OH" 0 1 131072 32 8 -0.654900
"H3T" "HO" 0 1 131072 33 1 0.439600
!entry.DA3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0
"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0

"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OH" 0 -1 0.0

"H3T" "HO" 0 -1 0.0
!entry.DA3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA3.unit.childsequence single int
2
!entry.DA3.unit.connect array int
1

0
!entry.DA3.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1
10 11 1
11 12 1
11 13 1
11 29 1

13 14 1
13 26 1
14 15 1
14 16 1
16 17 1
17 18 1
17 26 1
18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
23 25 1
25 26 1
27 28 1
27 29 1
27 32 1
29 30 1

29 31 1
32 33 1
!entry.DA3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32
"R" 1 "A" 33

!entry.DA3.unit.name single str
"DA3"
!entry.DA3.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450

2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548

5.072002 1.095281 4.737461
4.538887 -0.297039 3.315663
4.336753 -0.846471 2.077048
4.152405 -0.207228 1.226292
4.452865 -2.140973 2.049081
4.754063 -2.480044 3.363010
4.998001 -3.708197 3.989216

4.976786 -4.883494 3.345922
5.160722 -5.738815 3.850595
4.776859 -4.914033 2.356379
5.265303 -3.689337 5.302150
5.284983 -2.519871 5.935286
5.498276 -2.482153 6.993342
5.072691 -1.308506 5.455779

4.806144 -1.356352 4.133219
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897

!entry.DA3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 33 0 0 0 0
!entry.DA3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DA3" 1 34 1 "n" 0
!entry.DA3.unit.residuesPdbSequenceNumber array int
0
!entry.DA3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA3.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DA5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.442200

"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400
"H5'2" "H1" 0 1 131072 5 1 0.075400

"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100
"C1'" "CT" 0 1 131072 9 6 0.043100

"H1'" "H2" 0 1 131072 10 1 0.183800
"N9" "N*" 0 1 131072 11 7 -0.026800
"C8" "CK" 0 1 131072 12 6 0.160700
"H8" "H5" 0 1 131072 13 1 0.187700

"N7" "NB" 0 1 131072 14 7 -0.617500
"C5" "CB" 0 1 131072 15 6 0.072500
"C6" "CA" 0 1 131072 16 6 0.689700
"N6" "N2" 0 1 131072 17 7 -0.912300

"H61" "H" 0 1 131072 18 1 0.416700
"H62" "H" 0 1 131072 19 1 0.416700
"N1" "NC" 0 1 131072 20 7 -0.762400
"C2" "CQ" 0 1 131072 21 6 0.571600

"H2" "H5" 0 1 131072 22 1 0.059800
"N3" "NC" 0 1 131072 23 7 -0.741700
"C4" "CB" 0 1 131072 24 6 0.380000
"C3'" "CT" 0 1 131072 25 6 0.071300

"H3'" "H1" 0 1 131072 26 1 0.098500
"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800
"H2'2" "HC" 0 1 131072 29 1 0.071800

"O3'" "OS" 0 1 131072 30 8 -0.523200
!entry.DA5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0

"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0
"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0

"H62" "H" 0 -1 0.0
"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OS" 0 -1 0.0
!entry.DA5.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA5.unit.childsequence single int
2
!entry.DA5.unit.connect array int
0

30
!entry.DA5.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1
9 11 1
9 27 1
11 12 1
11 24 1

12 13 1
12 14 1
14 15 1
15 16 1
15 24 1
16 17 1
16 20 1
17 18 1
17 19 1
20 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1
25 30 1
27 28 1
27 29 1
!entry.DA5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
!entry.DA5.unit.name single str

"DA5"
!entry.DA5.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413326 3.114689
0.391898 3.029897 3.571783
1.142231 1.170002 3.879666
2.468206 0.737940 4.147081
2.623235 0.684861 5.224694
2.631883 -0.707510 3.706304
2.874744 -1.252950 2.473254
2.981762 -0.611824 1.610754

3.015090 -2.545282 2.486686
2.854438 -2.887092 3.824392
2.890064 -4.114821 4.496265
3.109811 -5.286601 3.884511
3.124377 -6.141797 4.421657
3.260876 -5.314613 2.886265
2.691907 -4.099278 5.821441

2.474289 -2.933294 6.423125
2.312233 -2.898286 7.490323
2.418510 -1.722694 5.899928
2.621154 -1.767152 4.565964
2.575663 2.966930 3.331153
2.881938 3.535803 2.453270
3.424932 1.698850 3.438932

4.177814 1.697080 2.650727
3.917296 1.672219 4.411027
2.785632 3.721376 4.515688
!entry.DA5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 30 0 0 0 0
!entry.DA5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DA5" 1 31 1 "n" 0
!entry.DA5.unit.residuesPdbSequenceNumber array int
0
!entry.DA5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DA5.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.DAN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800

"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400
"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900

"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100
"C1'" "CT" 0 1 131072 9 6 0.043100
"H1'" "H2" 0 1 131072 10 1 0.183800

"N9" "N*" 0 1 131072 11 7 -0.026800
"C8" "CK" 0 1 131072 12 6 0.160700
"H8" "H5" 0 1 131072 13 1 0.187700
"N7" "NB" 0 1 131072 14 7 -0.617500

"C5" "CB" 0 1 131072 15 6 0.072500
"C6" "CA" 0 1 131072 16 6 0.689700
"N6" "N2" 0 1 131072 17 7 -0.912300
"H61" "H" 0 1 131072 18 1 0.416700

"H62" "H" 0 1 131072 19 1 0.416700
"N1" "NC" 0 1 131072 20 7 -0.762400
"C2" "CQ" 0 1 131072 21 6 0.571600
"H2" "H5" 0 1 131072 22 1 0.059800

"N3" "NC" 0 1 131072 23 7 -0.741700
"C4" "CB" 0 1 131072 24 6 0.380000
"C3'" "CT" 0 1 131072 25 6 0.071300
"H3'" "H1" 0 1 131072 26 1 0.098500

"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800
"H2'2" "HC" 0 1 131072 29 1 0.071800
"O3'" "OH" 0 1 131072 30 8 -0.654900

"H3T" "HO" 0 1 131072 31 1 0.439600
!entry.DAN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0

"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0
"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0

"H62" "H" 0 -1 0.0
"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DAN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DAN.unit.childsequence single int
2

!entry.DAN.unit.connect array int
0
0
!entry.DAN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1

9 11 1
9 27 1
11 12 1
11 24 1
12 13 1
12 14 1
14 15 1
15 16 1
15 24 1
16 17 1
16 20 1
17 18 1
17 19 1
20 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1

25 30 1
27 28 1
27 29 1
30 31 1
!entry.DAN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
!entry.DAN.unit.name single str

"DAN"
!entry.DAN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413326 3.114689
0.391898 3.029897 3.571783
1.142231 1.170002 3.879666
2.468206 0.737940 4.147081
2.623235 0.684861 5.224694
2.631883 -0.707510 3.706304
2.874744 -1.252950 2.473254
2.981762 -0.611824 1.610754

3.015090 -2.545282 2.486686
2.854438 -2.887092 3.824392
2.890064 -4.114821 4.496265
3.109811 -5.286601 3.884511
3.124377 -6.141797 4.421657
3.260876 -5.314613 2.886265
2.691907 -4.099278 5.821441

2.474289 -2.933294 6.423125
2.312233 -2.898286 7.490323
2.418510 -1.722694 5.899928
2.621154 -1.767152 4.565964
2.575663 2.966930 3.331153
2.881938 3.535803 2.453270
3.424932 1.698850 3.438932

4.177814 1.697080 2.650727
3.917296 1.672219 4.411027
2.785632 3.721376 4.515688
3.677544 4.057879 4.629083
!entry.DAN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 31 0 0 0 0

!entry.DAN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DAN" 1 32 1 "n" 0
!entry.DAN.unit.residuesPdbSequenceNumber array int
0
!entry.DAN.unit.solventcap array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DAN.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DC.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100
"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400

"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400
"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900

"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100
"C1'" "CT" 0 1 131072 11 6 -0.011600
"H1'" "H2" 0 1 131072 12 1 0.196300

"N1" "N*" 0 1 131072 13 7 -0.033900
"C6" "CM" 0 1 131072 14 6 -0.018300
"H6" "H4" 0 1 131072 15 1 0.229300
"C5" "CM" 0 1 131072 16 6 -0.522200

"H5" "HA" 0 1 131072 17 1 0.186300
"C4" "CA" 0 1 131072 18 6 0.843900
"N4" "N2" 0 1 131072 19 7 -0.977300
"H41" "H" 0 1 131072 20 1 0.431400

"H42" "H" 0 1 131072 21 1 0.431400
"N3" "NC" 0 1 131072 22 7 -0.774800
"C2" "C" 0 1 131072 23 6 0.795900
"O2" "O" 0 1 131072 24 8 -0.654800

"C3'" "CT" 0 1 131072 25 6 0.071300
"H3'" "H1" 0 1 131072 26 1 0.098500
"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800

"H2'2" "HC" 0 1 131072 29 1 0.071800
"O3'" "OS" 0 1 131072 30 8 -0.523200
!entry.DC.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0

"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.DC.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DC.unit.childsequence single int
2
!entry.DC.unit.connect array int
1
30
!entry.DC.unit.connectivity table int atom1x int atom2x int flags
1 2 1

1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 25 1
10 11 1
11 12 1
11 13 1
11 27 1
13 14 1
13 23 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1

18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
25 26 1
25 27 1
25 30 1
27 28 1
27 29 1
!entry.DC.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1

"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7

"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
!entry.DC.unit.name single str

"DC"
!entry.DC.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.500572 -0.267961 3.326525

4.258199 -0.582249 2.025726
4.103961 0.202767 1.300219
4.205657 -1.878084 1.616273
4.010254 -2.111434 0.569628
4.416202 -2.880835 2.613801
4.378897 -4.158915 2.285902
4.532463 -4.836389 3.019078

4.201767 -4.434444 1.330491
4.652648 -2.564458 3.883801
4.701238 -1.262314 4.273234
4.918963 -0.927584 5.447181
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425

5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
!entry.DC.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 30 0 0 0 0
!entry.DC.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DC" 1 31 1 "n" 0
!entry.DC.unit.residuesPdbSequenceNumber array int
0
!entry.DC.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DC.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.DC3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100

"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400
"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400

"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900
"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100

"C1'" "CT" 0 1 131072 11 6 -0.011600
"H1'" "H2" 0 1 131072 12 1 0.196300
"N1" "N*" 0 1 131072 13 7 -0.033900
"C6" "CM" 0 1 131072 14 6 -0.018300

"H6" "H4" 0 1 131072 15 1 0.229300
"C5" "CM" 0 1 131072 16 6 -0.522200
"H5" "HA" 0 1 131072 17 1 0.186300
"C4" "CA" 0 1 131072 18 6 0.843900

"N4" "N2" 0 1 131072 19 7 -0.977300
"H41" "H" 0 1 131072 20 1 0.431400
"H42" "H" 0 1 131072 21 1 0.431400
"N3" "NC" 0 1 131072 22 7 -0.774800

"C2" "C" 0 1 131072 23 6 0.795900
"O2" "O" 0 1 131072 24 8 -0.654800
"C3'" "CT" 0 1 131072 25 6 0.071300
"H3'" "H1" 0 1 131072 26 1 0.098500

"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800
"H2'2" "HC" 0 1 131072 29 1 0.071800
"O3'" "OH" 0 1 131072 30 8 -0.654900

"H3T" "HO" 0 1 131072 31 1 0.439600
!entry.DC3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0

"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0

"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DC3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DC3.unit.childsequence single int
2

!entry.DC3.unit.connect array int
1
0
!entry.DC3.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 25 1

10 11 1
11 12 1
11 13 1
11 27 1
13 14 1
13 23 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
25 26 1
25 27 1
25 30 1

27 28 1
27 29 1
30 31 1
!entry.DC3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
!entry.DC3.unit.name single str

"DC3"
!entry.DC3.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.500572 -0.267961 3.326525

4.258199 -0.582249 2.025726
4.103961 0.202767 1.300219
4.205657 -1.878084 1.616273
4.010254 -2.111434 0.569628
4.416202 -2.880835 2.613801
4.378897 -4.158915 2.285902
4.532463 -4.836389 3.019078

4.201767 -4.434444 1.330491
4.652648 -2.564458 3.883801
4.701238 -1.262314 4.273234
4.918963 -0.927584 5.447181
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425

5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.DC3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 31 0 0 0 0

!entry.DC3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DC3" 1 32 1 "n" 0
!entry.DC3.unit.residuesPdbSequenceNumber array int
0
!entry.DC3.unit.solventcap array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DC3.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DC5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400

"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100

"C1'" "CT" 0 1 131072 9 6 -0.011600
"H1'" "H2" 0 1 131072 10 1 0.196300
"N1" "N*" 0 1 131072 11 7 -0.033900
"C6" "CM" 0 1 131072 12 6 -0.018300

"H6" "H4" 0 1 131072 13 1 0.229300
"C5" "CM" 0 1 131072 14 6 -0.522200
"H5" "HA" 0 1 131072 15 1 0.186300
"C4" "CA" 0 1 131072 16 6 0.843900

"N4" "N2" 0 1 131072 17 7 -0.977300
"H41" "H" 0 1 131072 18 1 0.431400
"H42" "H" 0 1 131072 19 1 0.431400
"N3" "NC" 0 1 131072 20 7 -0.774800

"C2" "C" 0 1 131072 21 6 0.795900
"O2" "O" 0 1 131072 22 8 -0.654800
"C3'" "CT" 0 1 131072 23 6 0.071300
"H3'" "H1" 0 1 131072 24 1 0.098500

"C2'" "CT" 0 1 131072 25 6 -0.085400
"H2'1" "HC" 0 1 131072 26 1 0.071800
"H2'2" "HC" 0 1 131072 27 1 0.071800
"O3'" "OS" 0 1 131072 28 8 -0.523200

!entry.DC5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0

"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.DC5.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DC5.unit.childsequence single int
2
!entry.DC5.unit.connect array int
0
28
!entry.DC5.unit.connectivity table int atom1x int atom2x int flags
1 2 1

2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 23 1
8 9 1
9 10 1
9 11 1
9 25 1
11 12 1
11 21 1
12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 20 1
17 18 1

17 19 1
20 21 1
21 22 1
23 24 1
23 25 1
23 28 1
25 26 1
25 27 1
!entry.DC5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1

"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7

"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
!entry.DC5.unit.name single str
"DC5"
!entry.DC5.unit.positions table dbl x dbl y dbl z

1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785

1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.591677 -0.679109 3.703402
2.814056 -0.989712 2.398154
2.904093 -0.203076 1.663650
2.926421 -2.283845 1.995422

3.104661 -2.514239 0.945065
2.799912 -3.288859 3.004800
2.898406 -4.565468 2.683913
2.803314 -5.244631 3.425395
3.063322 -4.838270 1.725539
2.582461 -2.976084 4.279079
2.473124 -1.675589 4.661648

2.270624 -1.344208 5.839264
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
!entry.DC5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 28 0 0 0 0
!entry.DC5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DC5" 1 29 1 "n" 0
!entry.DC5.unit.residuesPdbSequenceNumber array int

0
!entry.DC5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DC5.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DCN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400

"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100

"C1'" "CT" 0 1 131072 9 6 -0.011600
"H1'" "H2" 0 1 131072 10 1 0.196300
"N1" "N*" 0 1 131072 11 7 -0.033900
"C6" "CM" 0 1 131072 12 6 -0.018300

"H6" "H4" 0 1 131072 13 1 0.229300
"C5" "CM" 0 1 131072 14 6 -0.522200
"H5" "HA" 0 1 131072 15 1 0.186300
"C4" "CA" 0 1 131072 16 6 0.843900

"N4" "N2" 0 1 131072 17 7 -0.977300
"H41" "H" 0 1 131072 18 1 0.431400
"H42" "H" 0 1 131072 19 1 0.431400
"N3" "NC" 0 1 131072 20 7 -0.774800

"C2" "C" 0 1 131072 21 6 0.795900
"O2" "O" 0 1 131072 22 8 -0.654800
"C3'" "CT" 0 1 131072 23 6 0.071300
"H3'" "H1" 0 1 131072 24 1 0.098500

"C2'" "CT" 0 1 131072 25 6 -0.085400
"H2'1" "HC" 0 1 131072 26 1 0.071800
"H2'2" "HC" 0 1 131072 27 1 0.071800
"O3'" "OH" 0 1 131072 28 8 -0.654900

"H3T" "HO" 0 1 131072 29 1 0.439600
!entry.DCN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0

"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0

"H42" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0

!entry.DCN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DCN.unit.childsequence single int
2
!entry.DCN.unit.connect array int
0
0
!entry.DCN.unit.connectivity table int atom1x int atom2x int flags

1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 23 1
8 9 1
9 10 1
9 11 1
9 25 1
11 12 1
11 21 1
12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 20 1
17 18 1

17 19 1
20 21 1
21 22 1
23 24 1
23 25 1
23 28 1
25 26 1
25 27 1
28 29 1
!entry.DCN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1

"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7

"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
!entry.DCN.unit.name single str
"DCN"
!entry.DCN.unit.positions table dbl x dbl y dbl z

1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785

1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.591677 -0.679109 3.703402
2.814056 -0.989712 2.398154
2.904093 -0.203076 1.663650
2.926421 -2.283845 1.995422

3.104661 -2.514239 0.945065
2.799912 -3.288859 3.004800
2.898406 -4.565468 2.683913
2.803314 -5.244631 3.425395
3.063322 -4.838270 1.725539
2.582461 -2.976084 4.279079
2.473124 -1.675589 4.661648

2.270624 -1.344208 5.839264
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
3.677545 4.057868 4.629089

!entry.DCN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 29 0 0 0 0
!entry.DCN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DCN" 1 30 1 "n" 0
!entry.DCN.unit.residuesPdbSequenceNumber array int
0
!entry.DCN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DCN.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
!entry.DG.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100

"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400
"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400

"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900
"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100

"C1'" "CT" 0 1 131072 11 6 0.035800
"H1'" "H2" 0 1 131072 12 1 0.174600
"N9" "N*" 0 1 131072 13 7 0.057700
"C8" "CK" 0 1 131072 14 6 0.073600

"H8" "H5" 0 1 131072 15 1 0.199700
"N7" "NB" 0 1 131072 16 7 -0.572500
"C5" "CB" 0 1 131072 17 6 0.199100
"C6" "C" 0 1 131072 18 6 0.491800

"O6" "O" 0 1 131072 19 8 -0.569900
"N1" "NA" 0 1 131072 20 7 -0.505300
"H1" "H" 0 1 131072 21 1 0.352000
"C2" "CA" 0 1 131072 22 6 0.743200

"N2" "N2" 0 1 131072 23 7 -0.923000
"H21" "H" 0 1 131072 24 1 0.423500
"H22" "H" 0 1 131072 25 1 0.423500
"N3" "NC" 0 1 131072 26 7 -0.663600

"C4" "CB" 0 1 131072 27 6 0.181400
"C3'" "CT" 0 1 131072 28 6 0.071300
"H3'" "H1" 0 1 131072 29 1 0.098500
"C2'" "CT" 0 1 131072 30 6 -0.085400

"H2'1" "HC" 0 1 131072 31 1 0.071800
"H2'2" "HC" 0 1 131072 32 1 0.071800
"O3'" "OS" 0 1 131072 33 8 -0.523200
!entry.DG.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0

"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OS" 0 -1 0.0
!entry.DG.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DG.unit.childsequence single int
2
!entry.DG.unit.connect array int
1

33
!entry.DG.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 28 1
10 11 1
11 12 1
11 13 1
11 30 1

13 14 1
13 27 1
14 15 1
14 16 1
16 17 1
17 18 1
17 27 1
18 19 1
18 20 1
20 21 1
20 22 1
22 23 1
22 26 1
23 24 1
23 25 1
26 27 1
28 29 1
28 30 1
28 33 1

30 31 1
30 32 1
!entry.DG.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3

"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10

"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16

"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22

"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28

"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32
"R" 1 "A" 33
!entry.DG.unit.name single str

"DG"
!entry.DG.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.499533 -0.267934 3.326576

4.267504 -0.772686 2.063331
4.096308 -0.099877 1.236033
4.278741 -2.081203 2.002035
4.535095 -2.474583 3.310330
4.665031 -3.772051 3.872552
4.578059 -4.865457 3.315956
4.925924 -3.709096 5.246587

5.032526 -4.575560 5.734311
5.047712 -2.547461 5.981551
5.299265 -2.702442 7.288571
5.396738 -3.573950 7.789643
5.381214 -1.857324 7.835527
4.927829 -1.332945 5.452892
4.673998 -1.376548 4.117501

4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
!entry.DG.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 33 0 0 0 0
!entry.DG.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DG" 1 34 1 "n" 0
!entry.DG.unit.residuesPdbSequenceNumber array int

0
!entry.DG.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DG.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

!entry.DG3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100

"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400
"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400

"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900
"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100

"C1'" "CT" 0 1 131072 11 6 0.035800
"H1'" "H2" 0 1 131072 12 1 0.174600
"N9" "N*" 0 1 131072 13 7 0.057700
"C8" "CK" 0 1 131072 14 6 0.073600

"H8" "H5" 0 1 131072 15 1 0.199700
"N7" "NB" 0 1 131072 16 7 -0.572500
"C5" "CB" 0 1 131072 17 6 0.199100
"C6" "C" 0 1 131072 18 6 0.491800

"O6" "O" 0 1 131072 19 8 -0.569900
"N1" "NA" 0 1 131072 20 7 -0.505300
"H1" "H" 0 1 131072 21 1 0.352000
"C2" "CA" 0 1 131072 22 6 0.743200

"N2" "N2" 0 1 131072 23 7 -0.923000
"H21" "H" 0 1 131072 24 1 0.423500
"H22" "H" 0 1 131072 25 1 0.423500
"N3" "NC" 0 1 131072 26 7 -0.663600

"C4" "CB" 0 1 131072 27 6 0.181400
"C3'" "CT" 0 1 131072 28 6 0.071300
"H3'" "H1" 0 1 131072 29 1 0.098500
"C2'" "CT" 0 1 131072 30 6 -0.085400

"H2'1" "HC" 0 1 131072 31 1 0.071800
"H2'2" "HC" 0 1 131072 32 1 0.071800
"O3'" "OH" 0 1 131072 33 8 -0.654900
"H3T" "HO" 0 1 131072 34 1 0.439600

!entry.DG3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0

"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0

"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0

"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0

"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0
"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DG3.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DG3.unit.childsequence single int
2
!entry.DG3.unit.connect array int
1
0
!entry.DG3.unit.connectivity table int atom1x int atom2x int flags
1 2 1

1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 28 1
10 11 1
11 12 1
11 13 1
11 30 1
13 14 1
13 27 1
14 15 1
14 16 1
16 17 1
17 18 1
17 27 1

18 19 1
18 20 1
20 21 1
20 22 1
22 23 1
22 26 1
23 24 1
23 25 1
26 27 1
28 29 1
28 30 1
28 33 1
30 31 1
30 32 1
33 34 1
!entry.DG3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
"R" 1 "A" 34
!entry.DG3.unit.name single str
"DG3"
!entry.DG3.unit.positions table dbl x dbl y dbl z

2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186

2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.499533 -0.267934 3.326576
4.267504 -0.772686 2.063331
4.096308 -0.099877 1.236033
4.278741 -2.081203 2.002035

4.535095 -2.474583 3.310330
4.665031 -3.772051 3.872552
4.578059 -4.865457 3.315956
4.925924 -3.709096 5.246587
5.032526 -4.575560 5.734311
5.047712 -2.547461 5.981551
5.299265 -2.702442 7.288571

5.396738 -3.573950 7.789643
5.381214 -1.857324 7.835527
4.927829 -1.332945 5.452892
4.673998 -1.376548 4.117501
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425

5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.DG3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 34 0 0 0 0

!entry.DG3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DG3" 1 35 1 "n" 0
!entry.DG3.unit.residuesPdbSequenceNumber array int
0
!entry.DG3.unit.solventcap array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DG3.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DG5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400

"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100

"C1'" "CT" 0 1 131072 9 6 0.035800
"H1'" "H2" 0 1 131072 10 1 0.174600
"N9" "N*" 0 1 131072 11 7 0.057700
"C8" "CK" 0 1 131072 12 6 0.073600

"H8" "H5" 0 1 131072 13 1 0.199700
"N7" "NB" 0 1 131072 14 7 -0.572500
"C5" "CB" 0 1 131072 15 6 0.199100
"C6" "C" 0 1 131072 16 6 0.491800

"O6" "O" 0 1 131072 17 8 -0.569900
"N1" "NA" 0 1 131072 18 7 -0.505300
"H1" "H" 0 1 131072 19 1 0.352000
"C2" "CA" 0 1 131072 20 6 0.743200

"N2" "N2" 0 1 131072 21 7 -0.923000
"H21" "H" 0 1 131072 22 1 0.423500
"H22" "H" 0 1 131072 23 1 0.423500
"N3" "NC" 0 1 131072 24 7 -0.663600

"C4" "CB" 0 1 131072 25 6 0.181400
"C3'" "CT" 0 1 131072 26 6 0.071300
"H3'" "H1" 0 1 131072 27 1 0.098500
"C2'" "CT" 0 1 131072 28 6 -0.085400

"H2'1" "HC" 0 1 131072 29 1 0.071800
"H2'2" "HC" 0 1 131072 30 1 0.071800
"O3'" "OS" 0 1 131072 31 8 -0.523200
!entry.DG5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0

"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0
"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0

"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.DG5.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DG5.unit.childsequence single int
2
!entry.DG5.unit.connect array int
0
31
!entry.DG5.unit.connectivity table int atom1x int atom2x int flags
1 2 1

2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 26 1
8 9 1
9 10 1
9 11 1
9 28 1
11 12 1
11 25 1
12 13 1
12 14 1
14 15 1
15 16 1
15 25 1
16 17 1
16 18 1

18 19 1
18 20 1
20 21 1
20 24 1
21 22 1
21 23 1
24 25 1
26 27 1
26 28 1
26 31 1
28 29 1
28 30 1
!entry.DG5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

!entry.DG5.unit.name single str
"DG5"
!entry.DG5.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689

0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.590683 -0.679099 3.703095

2.813129 -1.180191 2.436673
2.923923 -0.505431 1.600717
2.866570 -2.487996 2.382915
2.666619 -2.884785 3.699987
2.618174 -4.183247 4.272741
2.745116 -5.274679 3.719964
2.392360 -4.124070 5.653142

2.340247 -4.991530 6.147911
2.235990 -2.964893 6.385439
2.027970 -3.123384 7.699672
1.962798 -3.996108 8.203861
1.903763 -2.280230 8.241672
2.283792 -1.749405 5.847662
2.502700 -1.789344 4.505990

2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
!entry.DG5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 31 0 0 0 0
!entry.DG5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DG5" 1 32 1 "n" 0
!entry.DG5.unit.residuesPdbSequenceNumber array int

0
!entry.DG5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DG5.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DGN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400

"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100

"C1'" "CT" 0 1 131072 9 6 0.035800
"H1'" "H2" 0 1 131072 10 1 0.174600
"N9" "N*" 0 1 131072 11 7 0.057700
"C8" "CK" 0 1 131072 12 6 0.073600

"H8" "H5" 0 1 131072 13 1 0.199700
"N7" "NB" 0 1 131072 14 7 -0.572500
"C5" "CB" 0 1 131072 15 6 0.199100
"C6" "C" 0 1 131072 16 6 0.491800

"O6" "O" 0 1 131072 17 8 -0.569900
"N1" "NA" 0 1 131072 18 7 -0.505300
"H1" "H" 0 1 131072 19 1 0.352000
"C2" "CA" 0 1 131072 20 6 0.743200

"N2" "N2" 0 1 131072 21 7 -0.923000
"H21" "H" 0 1 131072 22 1 0.423500
"H22" "H" 0 1 131072 23 1 0.423500
"N3" "NC" 0 1 131072 24 7 -0.663600

"C4" "CB" 0 1 131072 25 6 0.181400
"C3'" "CT" 0 1 131072 26 6 0.071300
"H3'" "H1" 0 1 131072 27 1 0.098500
"C2'" "CT" 0 1 131072 28 6 -0.085400

"H2'1" "HC" 0 1 131072 29 1 0.071800
"H2'2" "HC" 0 1 131072 30 1 0.071800
"O3'" "OH" 0 1 131072 31 8 -0.654900
"H3T" "HO" 0 1 131072 32 1 0.439600

!entry.DGN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0

"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DGN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DGN.unit.childsequence single int
2

!entry.DGN.unit.connect array int
0
0
!entry.DGN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 26 1
8 9 1
9 10 1

9 11 1
9 28 1
11 12 1
11 25 1
12 13 1
12 14 1
14 15 1
15 16 1
15 25 1
16 17 1
16 18 1
18 19 1
18 20 1
20 21 1
20 24 1
21 22 1
21 23 1
24 25 1
26 27 1

26 28 1
26 31 1
28 29 1
28 30 1
31 32 1
!entry.DGN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1

"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8

"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32

!entry.DGN.unit.name single str
"DGN"
!entry.DGN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689

0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.590683 -0.679099 3.703095

2.813129 -1.180191 2.436673
2.923923 -0.505431 1.600717
2.866570 -2.487996 2.382915
2.666619 -2.884785 3.699987
2.618174 -4.183247 4.272741
2.745116 -5.274679 3.719964
2.392360 -4.124070 5.653142

2.340247 -4.991530 6.147911
2.235990 -2.964893 6.385439
2.027970 -3.123384 7.699672
1.962798 -3.996108 8.203861
1.903763 -2.280230 8.241672
2.283792 -1.749405 5.847662
2.502700 -1.789344 4.505990

2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
3.677545 4.057868 4.629089
!entry.DGN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 32 0 0 0 0
!entry.DGN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DGN" 1 33 1 "n" 0
!entry.DGN.unit.residuesPdbSequenceNumber array int

0
!entry.DGN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DGN.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DT.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100
"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400

"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400
"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900

"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100
"C1'" "CT" 0 1 131072 11 6 0.068000
"H1'" "H2" 0 1 131072 12 1 0.180400

"N1" "N*" 0 1 131072 13 7 -0.023900
"C6" "CM" 0 1 131072 14 6 -0.220900
"H6" "H4" 0 1 131072 15 1 0.260700
"C5" "CM" 0 1 131072 16 6 0.002500

"C7" "CT" 0 1 131072 17 6 -0.226900
"H71" "HC" 0 1 131072 18 1 0.077000
"H72" "HC" 0 1 131072 19 1 0.077000
"H73" "HC" 0 1 131072 20 1 0.077000

"C4" "C" 0 1 131072 21 6 0.519400
"O4" "O" 0 1 131072 22 8 -0.556300
"N3" "NA" 0 1 131072 23 7 -0.434000
"H3" "H" 0 1 131072 24 1 0.342000

"C2" "C" 0 1 131072 25 6 0.567700
"O2" "O" 0 1 131072 26 8 -0.588100
"C3'" "CT" 0 1 131072 27 6 0.071300
"H3'" "H1" 0 1 131072 28 1 0.098500

"C2'" "CT" 0 1 131072 29 6 -0.085400
"H2'1" "HC" 0 1 131072 30 1 0.071800
"H2'2" "HC" 0 1 131072 31 1 0.071800
"O3'" "OS" 0 1 131072 32 8 -0.523200

!entry.DT.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0

"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0

"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0

"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"C7" "CT" 0 -1 0.0
"H71" "HC" 0 -1 0.0
"H72" "HC" 0 -1 0.0

"H73" "HC" 0 -1 0.0
"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0

"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0

"H2'2" "HC" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.DT.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DT.unit.childsequence single int

2
!entry.DT.unit.connect array int
1
32
!entry.DT.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1

10 11 1
11 12 1
11 13 1
11 29 1
13 14 1
13 25 1
14 15 1
14 16 1
16 17 1
16 21 1
17 18 1
17 19 1
17 20 1
21 22 1
21 23 1
23 24 1
23 25 1
25 26 1
27 28 1

27 29 1
27 32 1
29 30 1
29 31 1
!entry.DT.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32
!entry.DT.unit.name single str

"DT"
!entry.DT.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538757 -0.306565 3.312624

4.316907 -0.672508 2.011175
4.145435 0.083636 1.259348
4.360319 -1.957589 1.633974
4.118886 -2.368545 0.211713
4.859541 -1.896829 -0.434053
4.201276 -3.452127 0.127085
3.120150 -2.055730 -0.092873

4.642747 -2.996990 2.589735
4.702951 -4.199184 2.336743
4.852825 -2.538493 3.874277
5.070434 -3.289149 4.634055
4.814724 -1.223882 4.292304
5.014668 -0.915001 5.455495
4.415606 3.377827 2.961306

4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.025106 2.060820 3.524673
5.029898 4.128649 3.998279
!entry.DT.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 32 0 0 0 0
!entry.DT.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DT" 1 33 1 "n" 0
!entry.DT.unit.residuesPdbSequenceNumber array int

0
!entry.DT.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DT.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DT3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.165900
"O1P" "O2" 0 1 131072 2 8 -0.776100
"O2P" "O2" 0 1 131072 3 8 -0.776100
"O5'" "OS" 0 1 131072 4 8 -0.495400

"C5'" "CT" 0 1 131072 5 6 -0.006900
"H5'1" "H1" 0 1 131072 6 1 0.075400
"H5'2" "H1" 0 1 131072 7 1 0.075400
"C4'" "CT" 0 1 131072 8 6 0.162900

"H4'" "H1" 0 1 131072 9 1 0.117600
"O4'" "OS" 0 1 131072 10 8 -0.369100
"C1'" "CT" 0 1 131072 11 6 0.068000
"H1'" "H2" 0 1 131072 12 1 0.180400

"N1" "N*" 0 1 131072 13 7 -0.023900
"C6" "CM" 0 1 131072 14 6 -0.220900
"H6" "H4" 0 1 131072 15 1 0.260700
"C5" "CM" 0 1 131072 16 6 0.002500

"C7" "CT" 0 1 131072 17 6 -0.226900
"H71" "HC" 0 1 131072 18 1 0.077000
"H72" "HC" 0 1 131072 19 1 0.077000
"H73" "HC" 0 1 131072 20 1 0.077000

"C4" "C" 0 1 131072 21 6 0.519400
"O4" "O" 0 1 131072 22 8 -0.556300
"N3" "NA" 0 1 131072 23 7 -0.434000
"H3" "H" 0 1 131072 24 1 0.342000

"C2" "C" 0 1 131072 25 6 0.567700
"O2" "O" 0 1 131072 26 8 -0.588100
"C3'" "CT" 0 1 131072 27 6 0.071300
"H3'" "H1" 0 1 131072 28 1 0.098500

"C2'" "CT" 0 1 131072 29 6 -0.085400
"H2'1" "HC" 0 1 131072 30 1 0.071800
"H2'2" "HC" 0 1 131072 31 1 0.071800
"O3'" "OH" 0 1 131072 32 8 -0.654900

"H3T" "HO" 0 1 131072 33 1 0.439600
!entry.DT3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0

"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"C7" "CT" 0 -1 0.0
"H71" "HC" 0 -1 0.0

"H72" "HC" 0 -1 0.0
"H73" "HC" 0 -1 0.0
"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0

"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DT3.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DT3.unit.childsequence single int
2
!entry.DT3.unit.connect array int
1
0
!entry.DT3.unit.connectivity table int atom1x int atom2x int flags
1 2 1

1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1
10 11 1
11 12 1
11 13 1
11 29 1
13 14 1
13 25 1
14 15 1
14 16 1
16 17 1
16 21 1
17 18 1

17 19 1
17 20 1
21 22 1
21 23 1
23 24 1
23 25 1
25 26 1
27 28 1
27 29 1
27 32 1
29 30 1
29 31 1
32 33 1
!entry.DT3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
!entry.DT3.unit.name single str
"DT3"
!entry.DT3.unit.positions table dbl x dbl y dbl z

2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186

2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538757 -0.306565 3.312624
4.316907 -0.672508 2.011175
4.145435 0.083636 1.259348
4.360319 -1.957589 1.633974

4.118886 -2.368545 0.211713
4.859541 -1.896829 -0.434053
4.201276 -3.452127 0.127085
3.120150 -2.055730 -0.092873
4.642747 -2.996990 2.589735
4.702951 -4.199184 2.336743
4.852825 -2.538493 3.874277

5.070434 -3.289149 4.634055
4.814724 -1.223882 4.292304
5.014668 -0.915001 5.455495
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.025106 2.060820 3.524673

5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.DT3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 33 0 0 0 0
!entry.DT3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DT3" 1 34 1 "n" 0
!entry.DT3.unit.residuesPdbSequenceNumber array int
0
!entry.DT3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DT3.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.DT5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.442200

"O5'" "OH" 0 1 131072 2 8 -0.631800
"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400
"H5'2" "H1" 0 1 131072 5 1 0.075400

"C4'" "CT" 0 1 131072 6 6 0.162900
"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100
"C1'" "CT" 0 1 131072 9 6 0.068000

"H1'" "H2" 0 1 131072 10 1 0.180400
"N1" "N*" 0 1 131072 11 7 -0.023900
"C6" "CM" 0 1 131072 12 6 -0.220900
"H6" "H4" 0 1 131072 13 1 0.260700

"C5" "CM" 0 1 131072 14 6 0.002500
"C7" "CT" 0 1 131072 15 6 -0.226900
"H71" "HC" 0 1 131072 16 1 0.077000
"H72" "HC" 0 1 131072 17 1 0.077000

"H73" "HC" 0 1 131072 18 1 0.077000
"C4" "C" 0 1 131072 19 6 0.519400
"O4" "O" 0 1 131072 20 8 -0.556300
"N3" "NA" 0 1 131072 21 7 -0.434000

"H3" "H" 0 1 131072 22 1 0.342000
"C2" "C" 0 1 131072 23 6 0.567700
"O2" "O" 0 1 131072 24 8 -0.588100
"C3'" "CT" 0 1 131072 25 6 0.071300

"H3'" "H1" 0 1 131072 26 1 0.098500
"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800
"H2'2" "HC" 0 1 131072 29 1 0.071800

"O3'" "OS" 0 1 131072 30 8 -0.523200
!entry.DT5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0

"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"C7" "CT" 0 -1 0.0
"H71" "HC" 0 -1 0.0
"H72" "HC" 0 -1 0.0
"H73" "HC" 0 -1 0.0

"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OS" 0 -1 0.0
!entry.DT5.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DT5.unit.childsequence single int
2
!entry.DT5.unit.connect array int
0

30
!entry.DT5.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1
9 11 1
9 27 1
11 12 1
11 23 1

12 13 1
12 14 1
14 15 1
14 19 1
15 16 1
15 17 1
15 18 1
19 20 1
19 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1
25 30 1
27 28 1
27 29 1
!entry.DT5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
!entry.DT5.unit.name single str

"DT5"
!entry.DT5.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.632954 -0.717027 3.703400
2.875704 -1.078951 2.404560
2.959033 -0.321303 1.639428

3.067013 -2.361006 2.064952
3.333432 -2.767553 0.645889
4.242255 -2.280543 0.292388
3.457936 -3.849201 0.594542
2.493979 -2.468758 0.018083
3.022940 -3.401293 3.059668
3.186163 -4.600921 2.842522

2.773361 -2.946917 4.338595
2.730570 -3.698396 5.126977
2.572586 -1.635486 4.718382
2.357491 -1.330167 5.879810
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933

4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
!entry.DT5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 30 0 0 0 0
!entry.DT5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"DT5" 1 31 1 "n" 0
!entry.DT5.unit.residuesPdbSequenceNumber array int
0
!entry.DT5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DT5.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.DTN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.442200
"O5'" "OH" 0 1 131072 2 8 -0.631800

"C5'" "CT" 0 1 131072 3 6 -0.006900
"H5'1" "H1" 0 1 131072 4 1 0.075400
"H5'2" "H1" 0 1 131072 5 1 0.075400
"C4'" "CT" 0 1 131072 6 6 0.162900

"H4'" "H1" 0 1 131072 7 1 0.117600
"O4'" "OS" 0 1 131072 8 8 -0.369100
"C1'" "CT" 0 1 131072 9 6 0.068000
"H1'" "H2" 0 1 131072 10 1 0.180400

"N1" "N*" 0 1 131072 11 7 -0.023900
"C6" "CM" 0 1 131072 12 6 -0.220900
"H6" "H4" 0 1 131072 13 1 0.260700
"C5" "CM" 0 1 131072 14 6 0.002500

"C7" "CT" 0 1 131072 15 6 -0.226900
"H71" "HC" 0 1 131072 16 1 0.077000
"H72" "HC" 0 1 131072 17 1 0.077000
"H73" "HC" 0 1 131072 18 1 0.077000

"C4" "C" 0 1 131072 19 6 0.519400
"O4" "O" 0 1 131072 20 8 -0.556300
"N3" "NA" 0 1 131072 21 7 -0.434000
"H3" "H" 0 1 131072 22 1 0.342000

"C2" "C" 0 1 131072 23 6 0.567700
"O2" "O" 0 1 131072 24 8 -0.588100
"C3'" "CT" 0 1 131072 25 6 0.071300
"H3'" "H1" 0 1 131072 26 1 0.098500

"C2'" "CT" 0 1 131072 27 6 -0.085400
"H2'1" "HC" 0 1 131072 28 1 0.071800
"H2'2" "HC" 0 1 131072 29 1 0.071800
"O3'" "OH" 0 1 131072 30 8 -0.654900

"H3T" "HO" 0 1 131072 31 1 0.439600
!entry.DTN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0

"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"C7" "CT" 0 -1 0.0
"H71" "HC" 0 -1 0.0
"H72" "HC" 0 -1 0.0
"H73" "HC" 0 -1 0.0

"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "HC" 0 -1 0.0
"H2'2" "HC" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.DTN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.DTN.unit.childsequence single int
2

!entry.DTN.unit.connect array int
0
0
!entry.DTN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1

9 11 1
9 27 1
11 12 1
11 23 1
12 13 1
12 14 1
14 15 1
14 19 1
15 16 1
15 17 1
15 18 1
19 20 1
19 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1
25 30 1

27 28 1
27 29 1
30 31 1
!entry.DTN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
!entry.DTN.unit.name single str

"DTN"
!entry.DTN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.632954 -0.717027 3.703400
2.875704 -1.078951 2.404560
2.959033 -0.321303 1.639428

3.067013 -2.361006 2.064952
3.333432 -2.767553 0.645889
4.242255 -2.280543 0.292388
3.457936 -3.849201 0.594542
2.493979 -2.468758 0.018083
3.022940 -3.401293 3.059668
3.186163 -4.600921 2.842522

2.773361 -2.946917 4.338595
2.730570 -3.698396 5.126977
2.572586 -1.635486 4.718382
2.357491 -1.330167 5.879810
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933

4.177812 1.697074 2.650729
3.917293 1.672208 4.411028
2.785632 3.721367 4.515693
3.677545 4.057868 4.629089
!entry.DTN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 31 0 0 0 0

!entry.DTN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"DTN" 1 32 1 "n" 0
!entry.DTN.unit.residuesPdbSequenceNumber array int
0
!entry.DTN.unit.solventcap array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.DTN.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RA.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000
"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900

"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900
"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500

"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800
"C1'" "CT" 0 1 131072 11 6 0.039400
"H1'" "H2" 0 1 131072 12 1 0.200700

"N9" "N*" 0 1 131072 13 7 -0.025100
"C8" "CK" 0 1 131072 14 6 0.200600
"H8" "H5" 0 1 131072 15 1 0.155300
"N7" "NB" 0 1 131072 16 7 -0.607300

"C5" "CB" 0 1 131072 17 6 0.051500
"C6" "CA" 0 1 131072 18 6 0.700900
"N6" "N2" 0 1 131072 19 7 -0.901900
"H61" "H" 0 1 131072 20 1 0.411500

"H62" "H" 0 1 131072 21 1 0.411500
"N1" "NC" 0 1 131072 22 7 -0.761500
"C2" "CQ" 0 1 131072 23 6 0.587500
"H2" "H5" 0 1 131072 24 1 0.047300

"N3" "NC" 0 1 131072 25 7 -0.699700
"C4" "CB" 0 1 131072 26 6 0.305300
"C3'" "CT" 0 1 131072 27 6 0.202200
"H3'" "H1" 0 1 131072 28 1 0.061500

"C2'" "CT" 0 1 131072 29 6 0.067000
"H2'1" "H1" 0 1 131072 30 1 0.097200
"O2'" "OH" 0 1 131072 31 8 -0.613900
"HO'2" "HO" 0 1 131072 32 1 0.418600

"O3'" "OS" 0 1 131072 33 8 -0.524600
!entry.RA.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0

"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0

"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0
"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.RA.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.RA.unit.childsequence single int
2
!entry.RA.unit.connect array int
1
33
!entry.RA.unit.connectivity table int atom1x int atom2x int flags
1 2 1

1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1
10 11 1
11 12 1
11 13 1
11 29 1
13 14 1
13 26 1
14 15 1
14 16 1
16 17 1
17 18 1
17 26 1

18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
23 25 1
25 26 1
27 28 1
27 29 1
27 33 1
29 30 1
29 31 1
31 32 1
!entry.RA.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
!entry.RA.unit.name single str
"RA"
!entry.RA.unit.positions table dbl x dbl y dbl z

2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186

2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538887 -0.297039 3.315663
4.336753 -0.846471 2.077048
4.152405 -0.207228 1.226292
4.452865 -2.140973 2.049081

4.754063 -2.480044 3.363010
4.998001 -3.708197 3.989216
4.976786 -4.883494 3.345922
5.160722 -5.738815 3.850595
4.776859 -4.914033 2.356379
5.265303 -3.689337 5.302150
5.284983 -2.519871 5.935286

5.498276 -2.482153 6.993342
5.072691 -1.308506 5.455779
4.806144 -1.356352 4.133219
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136

6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
!entry.RA.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 33 0 0 0 0
!entry.RA.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RA" 1 34 1 "n" 0
!entry.RA.unit.residuesPdbSequenceNumber array int
0
!entry.RA.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RA.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RA3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.166200

"O1P" "O2" 0 1 131072 2 8 -0.776000
"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900
"C5'" "CT" 0 1 131072 5 6 0.055800

"H5'1" "H1" 0 1 131072 6 1 0.067900
"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500
"H4'" "H1" 0 1 131072 9 1 0.117400

"O4'" "OS" 0 1 131072 10 8 -0.354800
"C1'" "CT" 0 1 131072 11 6 0.039400
"H1'" "H2" 0 1 131072 12 1 0.200700
"N9" "N*" 0 1 131072 13 7 -0.025100

"C8" "CK" 0 1 131072 14 6 0.200600
"H8" "H5" 0 1 131072 15 1 0.155300
"N7" "NB" 0 1 131072 16 7 -0.607300
"C5" "CB" 0 1 131072 17 6 0.051500

"C6" "CA" 0 1 131072 18 6 0.700900
"N6" "N2" 0 1 131072 19 7 -0.901900
"H61" "H" 0 1 131072 20 1 0.411500
"H62" "H" 0 1 131072 21 1 0.411500

"N1" "NC" 0 1 131072 22 7 -0.761500
"C2" "CQ" 0 1 131072 23 6 0.587500
"H2" "H5" 0 1 131072 24 1 0.047300
"N3" "NC" 0 1 131072 25 7 -0.699700

"C4" "CB" 0 1 131072 26 6 0.305300
"C3'" "CT" 0 1 131072 27 6 0.202200
"H3'" "H1" 0 1 131072 28 1 0.061500
"C2'" "CT" 0 1 131072 29 6 0.067000

"H2'1" "H1" 0 1 131072 30 1 0.097200
"O2'" "OH" 0 1 131072 31 8 -0.613900
"HO'2" "HO" 0 1 131072 32 1 0.418600
"O3'" "OH" 0 1 131072 33 8 -0.654100

"H3T" "HO" 0 1 131072 34 1 0.437600
!entry.RA3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0

"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0

"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0
"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0

!entry.RA3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RA3.unit.childsequence single int
2
!entry.RA3.unit.connect array int
1
0
!entry.RA3.unit.connectivity table int atom1x int atom2x int flags

1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 27 1
10 11 1
11 12 1
11 13 1
11 29 1
13 14 1
13 26 1
14 15 1
14 16 1
16 17 1
17 18 1

17 26 1
18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
23 25 1
25 26 1
27 28 1
27 29 1
27 33 1
29 30 1
29 31 1
31 32 1
33 34 1
!entry.RA3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
"R" 1 "A" 34
!entry.RA3.unit.name single str
"RA3"
!entry.RA3.unit.positions table dbl x dbl y dbl z

2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186

2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538887 -0.297039 3.315663
4.336753 -0.846471 2.077048
4.152405 -0.207228 1.226292
4.452865 -2.140973 2.049081

4.754063 -2.480044 3.363010
4.998001 -3.708197 3.989216
4.976786 -4.883494 3.345922
5.160722 -5.738815 3.850595
4.776859 -4.914033 2.356379
5.265303 -3.689337 5.302150
5.284983 -2.519871 5.935286

5.498276 -2.482153 6.993342
5.072691 -1.308506 5.455779
4.806144 -1.356352 4.133219
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136

6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.RA3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 34 0 0 0 0
!entry.RA3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RA3" 1 35 1 "n" 0
!entry.RA3.unit.residuesPdbSequenceNumber array int
0
!entry.RA3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RA3.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RA5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.429500

"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900
"H5'2" "H1" 0 1 131072 5 1 0.067900

"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800
"C1'" "CT" 0 1 131072 9 6 0.039400

"H1'" "H2" 0 1 131072 10 1 0.200700
"N9" "N*" 0 1 131072 11 7 -0.025100
"C8" "CK" 0 1 131072 12 6 0.200600
"H8" "H5" 0 1 131072 13 1 0.155300

"N7" "NB" 0 1 131072 14 7 -0.607300
"C5" "CB" 0 1 131072 15 6 0.051500
"C6" "CA" 0 1 131072 16 6 0.700900
"N6" "N2" 0 1 131072 17 7 -0.901900

"H61" "H" 0 1 131072 18 1 0.411500
"H62" "H" 0 1 131072 19 1 0.411500
"N1" "NC" 0 1 131072 20 7 -0.761500
"C2" "CQ" 0 1 131072 21 6 0.587500

"H2" "H5" 0 1 131072 22 1 0.047300
"N3" "NC" 0 1 131072 23 7 -0.699700
"C4" "CB" 0 1 131072 24 6 0.305300
"C3'" "CT" 0 1 131072 25 6 0.202200

"H3'" "H1" 0 1 131072 26 1 0.061500
"C2'" "CT" 0 1 131072 27 6 0.067000
"H2'1" "H1" 0 1 131072 28 1 0.097200
"O2'" "OH" 0 1 131072 29 8 -0.613900

"HO'2" "HO" 0 1 131072 30 1 0.418600
"O3'" "OS" 0 1 131072 31 8 -0.524600
!entry.RA5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0

"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0
"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.RA5.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.RA5.unit.childsequence single int
2
!entry.RA5.unit.connect array int
0
31
!entry.RA5.unit.connectivity table int atom1x int atom2x int flags
1 2 1

2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1
9 11 1
9 27 1
11 12 1
11 24 1
12 13 1
12 14 1
14 15 1
15 16 1
15 24 1
16 17 1
16 20 1

17 18 1
17 19 1
20 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1
25 31 1
27 28 1
27 29 1
29 30 1
!entry.RA5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

!entry.RA5.unit.name single str
"RA5"
!entry.RA5.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689

0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413326 3.114689
0.391898 3.029897 3.571783
1.142231 1.170002 3.879666
2.468206 0.737940 4.147081
2.623235 0.684861 5.224694
2.631883 -0.707510 3.706304

2.874744 -1.252950 2.473254
2.981762 -0.611824 1.610754
3.015090 -2.545282 2.486686
2.854438 -2.887092 3.824392
2.890064 -4.114821 4.496265
3.109811 -5.286601 3.884511
3.124377 -6.141797 4.421657

3.260876 -5.314613 2.886265
2.691907 -4.099278 5.821441
2.474289 -2.933294 6.423125
2.312233 -2.898286 7.490323
2.418510 -1.722694 5.899928
2.621154 -1.767152 4.565964
2.575663 2.966930 3.331153

2.881938 3.535803 2.453270
3.424932 1.698850 3.438932
4.177814 1.697080 2.650727
4.070877 1.663912 4.714249
4.591411 0.857807 4.743237
2.785632 3.721376 4.515688
!entry.RA5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 31 0 0 0 0
!entry.RA5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RA5" 1 32 1 "n" 0
!entry.RA5.unit.residuesPdbSequenceNumber array int

0
!entry.RA5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RA5.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RAN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900

"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800

"C1'" "CT" 0 1 131072 9 6 0.039400
"H1'" "H2" 0 1 131072 10 1 0.200700
"N9" "N*" 0 1 131072 11 7 -0.025100
"C8" "CK" 0 1 131072 12 6 0.200600

"H8" "H5" 0 1 131072 13 1 0.155300
"N7" "NB" 0 1 131072 14 7 -0.607300
"C5" "CB" 0 1 131072 15 6 0.051500
"C6" "CA" 0 1 131072 16 6 0.700900

"N6" "N2" 0 1 131072 17 7 -0.901900
"H61" "H" 0 1 131072 18 1 0.411500
"H62" "H" 0 1 131072 19 1 0.411500
"N1" "NC" 0 1 131072 20 7 -0.761500

"C2" "CQ" 0 1 131072 21 6 0.587500
"H2" "H5" 0 1 131072 22 1 0.047300
"N3" "NC" 0 1 131072 23 7 -0.699700
"C4" "CB" 0 1 131072 24 6 0.305300

"C3'" "CT" 0 1 131072 25 6 0.202200
"H3'" "H1" 0 1 131072 26 1 0.061500
"C2'" "CT" 0 1 131072 27 6 0.067000
"H2'1" "H1" 0 1 131072 28 1 0.097200

"O2'" "OH" 0 1 131072 29 8 -0.613900
"HO'2" "HO" 0 1 131072 30 1 0.418600
"O3'" "OH" 0 1 131072 31 8 -0.654100
"H3T" "HO" 0 1 131072 32 1 0.437600

!entry.RAN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "CA" 0 -1 0.0
"N6" "N2" 0 -1 0.0
"H61" "H" 0 -1 0.0
"H62" "H" 0 -1 0.0

"N1" "NC" 0 -1 0.0
"C2" "CQ" 0 -1 0.0
"H2" "H5" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.RAN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RAN.unit.childsequence single int
2

!entry.RAN.unit.connect array int
0
0
!entry.RAN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 25 1
8 9 1
9 10 1

9 11 1
9 27 1
11 12 1
11 24 1
12 13 1
12 14 1
14 15 1
15 16 1
15 24 1
16 17 1
16 20 1
17 18 1
17 19 1
20 21 1
21 22 1
21 23 1
23 24 1
25 26 1
25 27 1

25 31 1
27 28 1
27 29 1
29 30 1
31 32 1
!entry.RAN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1

"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8

"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32

!entry.RAN.unit.name single str
"RAN"
!entry.RAN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689

0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413326 3.114689
0.391898 3.029897 3.571783
1.142231 1.170002 3.879666
2.468206 0.737940 4.147081
2.623235 0.684861 5.224694
2.631883 -0.707510 3.706304

2.874744 -1.252950 2.473254
2.981762 -0.611824 1.610754
3.015090 -2.545282 2.486686
2.854438 -2.887092 3.824392
2.890064 -4.114821 4.496265
3.109811 -5.286601 3.884511
3.124377 -6.141797 4.421657

3.260876 -5.314613 2.886265
2.691907 -4.099278 5.821441
2.474289 -2.933294 6.423125
2.312233 -2.898286 7.490323
2.418510 -1.722694 5.899928
2.621154 -1.767152 4.565964
2.575663 2.966930 3.331153

2.881938 3.535803 2.453270
3.424932 1.698850 3.438932
4.177814 1.697080 2.650727
4.070877 1.663912 4.714249
4.591411 0.857807 4.743237
2.785632 3.721376 4.515688
3.677544 4.057879 4.629083
!entry.RAN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 32 0 0 0 0
!entry.RAN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RAN" 1 33 1 "n" 0
!entry.RAN.unit.residuesPdbSequenceNumber array int

0
!entry.RAN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RAN.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RC.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000
"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900

"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900
"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500

"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800
"C1'" "CT" 0 1 131072 11 6 0.006600
"H1'" "H2" 0 1 131072 12 1 0.202900

"N1" "N*" 0 1 131072 13 7 -0.048400
"C6" "CM" 0 1 131072 14 6 0.005300
"H6" "H4" 0 1 131072 15 1 0.195800
"C5" "CM" 0 1 131072 16 6 -0.521500

"H5" "HA" 0 1 131072 17 1 0.192800
"C4" "CA" 0 1 131072 18 6 0.818500
"N4" "N2" 0 1 131072 19 7 -0.953000
"H41" "H" 0 1 131072 20 1 0.423400

"H42" "H" 0 1 131072 21 1 0.423400
"N3" "NC" 0 1 131072 22 7 -0.758400
"C2" "C" 0 1 131072 23 6 0.753800
"O2" "O" 0 1 131072 24 8 -0.625200

"C3'" "CT" 0 1 131072 25 6 0.202200
"H3'" "H1" 0 1 131072 26 1 0.061500
"C2'" "CT" 0 1 131072 27 6 0.067000
"H2'1" "H1" 0 1 131072 28 1 0.097200

"O2'" "OH" 0 1 131072 29 8 -0.613900
"HO'2" "HO" 0 1 131072 30 1 0.418600
"O3'" "OS" 0 1 131072 31 8 -0.524600
!entry.RC.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0

"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0

!entry.RC.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC.unit.childsequence single int
2
!entry.RC.unit.connect array int
1
31
!entry.RC.unit.connectivity table int atom1x int atom2x int flags

1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 25 1
10 11 1
11 12 1
11 13 1
11 27 1
13 14 1
13 23 1
14 15 1
14 16 1
16 17 1
16 18 1

18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
25 26 1
25 27 1
25 31 1
27 28 1
27 29 1
29 30 1
!entry.RC.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

!entry.RC.unit.name single str
"RC"
!entry.RC.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450

2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548

5.072002 1.095281 4.737461
4.500572 -0.267961 3.326525
4.258199 -0.582249 2.025726
4.103961 0.202767 1.300219
4.205657 -1.878084 1.616273
4.010254 -2.111434 0.569628
4.416202 -2.880835 2.613801

4.378897 -4.158915 2.285902
4.532463 -4.836389 3.019078
4.201767 -4.434444 1.330491
4.652648 -2.564458 3.883801
4.701238 -1.262314 4.273234
4.918963 -0.927584 5.447181
4.415606 3.377827 2.961306

4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136
6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
!entry.RC.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 31 0 0 0 0
!entry.RC.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RC" 1 32 1 "n" 0
!entry.RC.unit.residuesPdbSequenceNumber array int

0
!entry.RC.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RC3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000
"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900

"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900
"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500

"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800
"C1'" "CT" 0 1 131072 11 6 0.006600
"H1'" "H2" 0 1 131072 12 1 0.202900

"N1" "N*" 0 1 131072 13 7 -0.048400
"C6" "CM" 0 1 131072 14 6 0.005300
"H6" "H4" 0 1 131072 15 1 0.195800
"C5" "CM" 0 1 131072 16 6 -0.521500

"H5" "HA" 0 1 131072 17 1 0.192800
"C4" "CA" 0 1 131072 18 6 0.818500
"N4" "N2" 0 1 131072 19 7 -0.953000
"H41" "H" 0 1 131072 20 1 0.423400

"H42" "H" 0 1 131072 21 1 0.423400
"N3" "NC" 0 1 131072 22 7 -0.758400
"C2" "C" 0 1 131072 23 6 0.753800
"O2" "O" 0 1 131072 24 8 -0.625200

"C3'" "CT" 0 1 131072 25 6 0.202200
"H3'" "H1" 0 1 131072 26 1 0.061500
"C2'" "CT" 0 1 131072 27 6 0.067000
"H2'1" "H1" 0 1 131072 28 1 0.097200

"O2'" "OH" 0 1 131072 29 8 -0.613900
"HO'2" "HO" 0 1 131072 30 1 0.418600
"O3'" "OH" 0 1 131072 31 8 -0.654100
"H3T" "HO" 0 1 131072 32 1 0.437600

!entry.RC3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0

"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0

"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0

"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0

"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.RC3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC3.unit.childsequence single int
2

!entry.RC3.unit.connect array int
1
0
!entry.RC3.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 25 1

10 11 1
11 12 1
11 13 1
11 27 1
13 14 1
13 23 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1
18 22 1
19 20 1
19 21 1
22 23 1
23 24 1
25 26 1
25 27 1
25 31 1

27 28 1
27 29 1
29 30 1
31 32 1
!entry.RC3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32
!entry.RC3.unit.name single str

"RC3"
!entry.RC3.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.500572 -0.267961 3.326525

4.258199 -0.582249 2.025726
4.103961 0.202767 1.300219
4.205657 -1.878084 1.616273
4.010254 -2.111434 0.569628
4.416202 -2.880835 2.613801
4.378897 -4.158915 2.285902
4.532463 -4.836389 3.019078

4.201767 -4.434444 1.330491
4.652648 -2.564458 3.883801
4.701238 -1.262314 4.273234
4.918963 -0.927584 5.447181
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425

5.668211 2.081313 1.781301
6.272982 2.049941 3.757136
6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.RC3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 32 0 0 0 0
!entry.RC3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RC3" 1 33 1 "n" 0
!entry.RC3.unit.residuesPdbSequenceNumber array int

0
!entry.RC3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC3.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RC5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900

"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800

"C1'" "CT" 0 1 131072 9 6 0.006600
"H1'" "H2" 0 1 131072 10 1 0.202900
"N1" "N*" 0 1 131072 11 7 -0.048400
"C6" "CM" 0 1 131072 12 6 0.005300

"H6" "H4" 0 1 131072 13 1 0.195800
"C5" "CM" 0 1 131072 14 6 -0.521500
"H5" "HA" 0 1 131072 15 1 0.192800
"C4" "CA" 0 1 131072 16 6 0.818500

"N4" "N2" 0 1 131072 17 7 -0.953000
"H41" "H" 0 1 131072 18 1 0.423400
"H42" "H" 0 1 131072 19 1 0.423400
"N3" "NC" 0 1 131072 20 7 -0.758400

"C2" "C" 0 1 131072 21 6 0.753800
"O2" "O" 0 1 131072 22 8 -0.625200
"C3'" "CT" 0 1 131072 23 6 0.202200
"H3'" "H1" 0 1 131072 24 1 0.061500

"C2'" "CT" 0 1 131072 25 6 0.067000
"H2'1" "H1" 0 1 131072 26 1 0.097200
"O2'" "OH" 0 1 131072 27 8 -0.613900
"HO'2" "HO" 0 1 131072 28 1 0.418600

"O3'" "OS" 0 1 131072 29 8 -0.524600
!entry.RC5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0

"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0

"H42" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0

!entry.RC5.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC5.unit.childsequence single int
2
!entry.RC5.unit.connect array int
0
29
!entry.RC5.unit.connectivity table int atom1x int atom2x int flags

1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 23 1
8 9 1
9 10 1
9 11 1
9 25 1
11 12 1
11 21 1
12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 20 1
17 18 1

17 19 1
20 21 1
21 22 1
23 24 1
23 25 1
23 29 1
25 26 1
25 27 1
27 28 1
!entry.RC5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1

"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7

"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
!entry.RC5.unit.name single str
"RC5"
!entry.RC5.unit.positions table dbl x dbl y dbl z

1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785

1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.591677 -0.679109 3.703402
2.814056 -0.989712 2.398154
2.904093 -0.203076 1.663650
2.926421 -2.283845 1.995422

3.104661 -2.514239 0.945065
2.799912 -3.288859 3.004800
2.898406 -4.565468 2.683913
2.803314 -5.244631 3.425395
3.063322 -4.838270 1.725539
2.582461 -2.976084 4.279079
2.473124 -1.675589 4.661648

2.270624 -1.344208 5.839264
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237
2.785632 3.721367 4.515693

!entry.RC5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 29 0 0 0 0
!entry.RC5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RC5" 1 30 1 "n" 0
!entry.RC5.unit.residuesPdbSequenceNumber array int
0
!entry.RC5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RC5.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
!entry.RCN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300

"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900
"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500

"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800
"C1'" "CT" 0 1 131072 9 6 0.006600
"H1'" "H2" 0 1 131072 10 1 0.202900

"N1" "N*" 0 1 131072 11 7 -0.048400
"C6" "CM" 0 1 131072 12 6 0.005300
"H6" "H4" 0 1 131072 13 1 0.195800
"C5" "CM" 0 1 131072 14 6 -0.521500

"H5" "HA" 0 1 131072 15 1 0.192800
"C4" "CA" 0 1 131072 16 6 0.818500
"N4" "N2" 0 1 131072 17 7 -0.953000
"H41" "H" 0 1 131072 18 1 0.423400

"H42" "H" 0 1 131072 19 1 0.423400
"N3" "NC" 0 1 131072 20 7 -0.758400
"C2" "C" 0 1 131072 21 6 0.753800
"O2" "O" 0 1 131072 22 8 -0.625200

"C3'" "CT" 0 1 131072 23 6 0.202200
"H3'" "H1" 0 1 131072 24 1 0.061500
"C2'" "CT" 0 1 131072 25 6 0.067000
"H2'1" "H1" 0 1 131072 26 1 0.097200

"O2'" "OH" 0 1 131072 27 8 -0.613900
"HO'2" "HO" 0 1 131072 28 1 0.418600
"O3'" "OH" 0 1 131072 29 8 -0.654100
"H3T" "HO" 0 1 131072 30 1 0.437600

!entry.RCN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0

"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "CA" 0 -1 0.0
"N4" "N2" 0 -1 0.0
"H41" "H" 0 -1 0.0
"H42" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OH" 0 -1 0.0

"H3T" "HO" 0 -1 0.0
!entry.RCN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RCN.unit.childsequence single int
2
!entry.RCN.unit.connect array int
0

0
!entry.RCN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 23 1
8 9 1
9 10 1
9 11 1
9 25 1
11 12 1
11 21 1

12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 20 1
17 18 1
17 19 1
20 21 1
21 22 1
23 24 1
23 25 1
23 29 1
25 26 1
25 27 1
27 28 1
29 30 1
!entry.RCN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
!entry.RCN.unit.name single str

"RCN"
!entry.RCN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.591677 -0.679109 3.703402
2.814056 -0.989712 2.398154
2.904093 -0.203076 1.663650

2.926421 -2.283845 1.995422
3.104661 -2.514239 0.945065
2.799912 -3.288859 3.004800
2.898406 -4.565468 2.683913
2.803314 -5.244631 3.425395
3.063322 -4.838270 1.725539
2.582461 -2.976084 4.279079

2.473124 -1.675589 4.661648
2.270624 -1.344208 5.839264
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237

2.785632 3.721367 4.515693
3.677545 4.057868 4.629089
!entry.RCN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 30 0 0 0 0
!entry.RCN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RCN" 1 31 1 "n" 0
!entry.RCN.unit.residuesPdbSequenceNumber array int
0
!entry.RCN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RCN.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.RG.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000

"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900
"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900

"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500
"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800

"C1'" "CT" 0 1 131072 11 6 0.019100
"H1'" "H2" 0 1 131072 12 1 0.200600
"N9" "N*" 0 1 131072 13 7 0.049200
"C8" "CK" 0 1 131072 14 6 0.137400

"H8" "H5" 0 1 131072 15 1 0.164000
"N7" "NB" 0 1 131072 16 7 -0.570900
"C5" "CB" 0 1 131072 17 6 0.174400
"C6" "C" 0 1 131072 18 6 0.477000

"O6" "O" 0 1 131072 19 8 -0.559700
"N1" "NA" 0 1 131072 20 7 -0.478700
"H1" "H" 0 1 131072 21 1 0.342400
"C2" "CA" 0 1 131072 22 6 0.765700

"N2" "N2" 0 1 131072 23 7 -0.967200
"H21" "H" 0 1 131072 24 1 0.436400
"H22" "H" 0 1 131072 25 1 0.436400
"N3" "NC" 0 1 131072 26 7 -0.632300

"C4" "CB" 0 1 131072 27 6 0.122200
"C3'" "CT" 0 1 131072 28 6 0.202200
"H3'" "H1" 0 1 131072 29 1 0.061500
"C2'" "CT" 0 1 131072 30 6 0.067000

"H2'1" "H1" 0 1 131072 31 1 0.097200
"O2'" "OH" 0 1 131072 32 8 -0.613900
"HO'2" "HO" 0 1 131072 33 1 0.418600
"O3'" "OS" 0 1 131072 34 8 -0.524600

!entry.RG.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0

"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0

"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0

"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0

"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0
"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0

"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0

"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.RG.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.RG.unit.childsequence single int
2
!entry.RG.unit.connect array int
1
34
!entry.RG.unit.connectivity table int atom1x int atom2x int flags
1 2 1

1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 28 1
10 11 1
11 12 1
11 13 1
11 30 1
13 14 1
13 27 1
14 15 1
14 16 1
16 17 1
17 18 1
17 27 1

18 19 1
18 20 1
20 21 1
20 22 1
22 23 1
22 26 1
23 24 1
23 25 1
26 27 1
28 29 1
28 30 1
28 34 1
30 31 1
30 32 1
32 33 1
!entry.RG.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
"R" 1 "A" 34
!entry.RG.unit.name single str
"RG"
!entry.RG.unit.positions table dbl x dbl y dbl z

2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887
1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186

2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.499533 -0.267934 3.326576
4.267504 -0.772686 2.063331
4.096308 -0.099877 1.236033
4.278741 -2.081203 2.002035

4.535095 -2.474583 3.310330
4.665031 -3.772051 3.872552
4.578059 -4.865457 3.315956
4.925924 -3.709096 5.246587
5.032526 -4.575560 5.734311
5.047712 -2.547461 5.981551
5.299265 -2.702442 7.288571

5.396738 -3.573950 7.789643
5.381214 -1.857324 7.835527
4.927829 -1.332945 5.452892
4.673998 -1.376548 4.117501
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425

5.668211 2.081313 1.781301
6.272982 2.049941 3.757136
6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
!entry.RG.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 34 0 0 0 0

!entry.RG.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RG" 1 35 1 "n" 0
!entry.RG.unit.residuesPdbSequenceNumber array int
0
!entry.RG.unit.solventcap array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.RG.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RG3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000
"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900

"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900
"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500

"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800
"C1'" "CT" 0 1 131072 11 6 0.019100
"H1'" "H2" 0 1 131072 12 1 0.200600

"N9" "N*" 0 1 131072 13 7 0.049200
"C8" "CK" 0 1 131072 14 6 0.137400
"H8" "H5" 0 1 131072 15 1 0.164000
"N7" "NB" 0 1 131072 16 7 -0.570900

"C5" "CB" 0 1 131072 17 6 0.174400
"C6" "C" 0 1 131072 18 6 0.477000
"O6" "O" 0 1 131072 19 8 -0.559700
"N1" "NA" 0 1 131072 20 7 -0.478700

"H1" "H" 0 1 131072 21 1 0.342400
"C2" "CA" 0 1 131072 22 6 0.765700
"N2" "N2" 0 1 131072 23 7 -0.967200
"H21" "H" 0 1 131072 24 1 0.436400

"H22" "H" 0 1 131072 25 1 0.436400
"N3" "NC" 0 1 131072 26 7 -0.632300
"C4" "CB" 0 1 131072 27 6 0.122200
"C3'" "CT" 0 1 131072 28 6 0.202200

"H3'" "H1" 0 1 131072 29 1 0.061500
"C2'" "CT" 0 1 131072 30 6 0.067000
"H2'1" "H1" 0 1 131072 31 1 0.097200
"O2'" "OH" 0 1 131072 32 8 -0.613900

"HO'2" "HO" 0 1 131072 33 1 0.418600
"O3'" "OH" 0 1 131072 34 8 -0.654100
"H3T" "HO" 0 1 131072 35 1 0.437600
!entry.RG3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0

"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0

"HO'2" "HO" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.RG3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0

!entry.RG3.unit.childsequence single int
2
!entry.RG3.unit.connect array int
1
0
!entry.RG3.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1

5 7 1
5 8 1
8 9 1
8 10 1
8 28 1
10 11 1
11 12 1
11 13 1
11 30 1
13 14 1
13 27 1
14 15 1
14 16 1
16 17 1
17 18 1
17 27 1
18 19 1
18 20 1
20 21 1
20 22 1

22 23 1
22 26 1
23 24 1
23 25 1
26 27 1
28 29 1
28 30 1
28 34 1
30 31 1
30 32 1
32 33 1
34 35 1
!entry.RG3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
"R" 1 "A" 34
"R" 1 "A" 35
!entry.RG3.unit.name single str

"RG3"
!entry.RG3.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.499533 -0.267934 3.326576

4.267504 -0.772686 2.063331
4.096308 -0.099877 1.236033
4.278741 -2.081203 2.002035
4.535095 -2.474583 3.310330
4.665031 -3.772051 3.872552
4.578059 -4.865457 3.315956
4.925924 -3.709096 5.246587

5.032526 -4.575560 5.734311
5.047712 -2.547461 5.981551
5.299265 -2.702442 7.288571
5.396738 -3.573950 7.789643
5.381214 -1.857324 7.835527
4.927829 -1.332945 5.452892
4.673998 -1.376548 4.117501

4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136
6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897

!entry.RG3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 35 0 0 0 0
!entry.RG3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RG3" 1 36 1 "n" 0
!entry.RG3.unit.residuesPdbSequenceNumber array int
0
!entry.RG3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RG3.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RG5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900

"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800

"C1'" "CT" 0 1 131072 9 6 0.019100
"H1'" "H2" 0 1 131072 10 1 0.200600
"N9" "N*" 0 1 131072 11 7 0.049200
"C8" "CK" 0 1 131072 12 6 0.137400

"H8" "H5" 0 1 131072 13 1 0.164000
"N7" "NB" 0 1 131072 14 7 -0.570900
"C5" "CB" 0 1 131072 15 6 0.174400
"C6" "C" 0 1 131072 16 6 0.477000

"O6" "O" 0 1 131072 17 8 -0.559700
"N1" "NA" 0 1 131072 18 7 -0.478700
"H1" "H" 0 1 131072 19 1 0.342400
"C2" "CA" 0 1 131072 20 6 0.765700

"N2" "N2" 0 1 131072 21 7 -0.967200
"H21" "H" 0 1 131072 22 1 0.436400
"H22" "H" 0 1 131072 23 1 0.436400
"N3" "NC" 0 1 131072 24 7 -0.632300

"C4" "CB" 0 1 131072 25 6 0.122200
"C3'" "CT" 0 1 131072 26 6 0.202200
"H3'" "H1" 0 1 131072 27 1 0.061500
"C2'" "CT" 0 1 131072 28 6 0.067000

"H2'1" "H1" 0 1 131072 29 1 0.097200
"O2'" "OH" 0 1 131072 30 8 -0.613900
"HO'2" "HO" 0 1 131072 31 1 0.418600
"O3'" "OS" 0 1 131072 32 8 -0.524600

!entry.RG5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0

"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0

"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0
"H8" "H5" 0 -1 0.0

"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0
"H1" "H" 0 -1 0.0

"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0
"C4" "CB" 0 -1 0.0

"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0

"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0
!entry.RG5.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RG5.unit.childsequence single int

2
!entry.RG5.unit.connect array int
0
32
!entry.RG5.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 26 1
8 9 1
9 10 1

9 11 1
9 28 1
11 12 1
11 25 1
12 13 1
12 14 1
14 15 1
15 16 1
15 25 1
16 17 1
16 18 1
18 19 1
18 20 1
20 21 1
20 24 1
21 22 1
21 23 1
24 25 1
26 27 1

26 28 1
26 32 1
28 29 1
28 30 1
30 31 1
!entry.RG5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1

"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8

"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
"R" 1 "A" 32

!entry.RG5.unit.name single str
"RG5"
!entry.RG5.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689

0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.590683 -0.679099 3.703095

2.813129 -1.180191 2.436673
2.923923 -0.505431 1.600717
2.866570 -2.487996 2.382915
2.666619 -2.884785 3.699987
2.618174 -4.183247 4.272741
2.745116 -5.274679 3.719964
2.392360 -4.124070 5.653142

2.340247 -4.991530 6.147911
2.235990 -2.964893 6.385439
2.027970 -3.123384 7.699672
1.962798 -3.996108 8.203861
1.903763 -2.280230 8.241672
2.283792 -1.749405 5.847662
2.502700 -1.789344 4.505990

2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237
2.785632 3.721367 4.515693
!entry.RG5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 32 0 0 0 0
!entry.RG5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RG5" 1 33 1 "n" 0
!entry.RG5.unit.residuesPdbSequenceNumber array int

0
!entry.RG5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RG5.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RGN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900

"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800

"C1'" "CT" 0 1 131072 9 6 0.019100
"H1'" "H2" 0 1 131072 10 1 0.200600
"N9" "N*" 0 1 131072 11 7 0.049200
"C8" "CK" 0 1 131072 12 6 0.137400

"H8" "H5" 0 1 131072 13 1 0.164000
"N7" "NB" 0 1 131072 14 7 -0.570900
"C5" "CB" 0 1 131072 15 6 0.174400
"C6" "C" 0 1 131072 16 6 0.477000

"O6" "O" 0 1 131072 17 8 -0.559700
"N1" "NA" 0 1 131072 18 7 -0.478700
"H1" "H" 0 1 131072 19 1 0.342400
"C2" "CA" 0 1 131072 20 6 0.765700

"N2" "N2" 0 1 131072 21 7 -0.967200
"H21" "H" 0 1 131072 22 1 0.436400
"H22" "H" 0 1 131072 23 1 0.436400
"N3" "NC" 0 1 131072 24 7 -0.632300

"C4" "CB" 0 1 131072 25 6 0.122200
"C3'" "CT" 0 1 131072 26 6 0.202200
"H3'" "H1" 0 1 131072 27 1 0.061500
"C2'" "CT" 0 1 131072 28 6 0.067000

"H2'1" "H1" 0 1 131072 29 1 0.097200
"O2'" "OH" 0 1 131072 30 8 -0.613900
"HO'2" "HO" 0 1 131072 31 1 0.418600
"O3'" "OH" 0 1 131072 32 8 -0.654100

"H3T" "HO" 0 1 131072 33 1 0.437600
!entry.RGN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N9" "N*" 0 -1 0.0
"C8" "CK" 0 -1 0.0

"H8" "H5" 0 -1 0.0
"N7" "NB" 0 -1 0.0
"C5" "CB" 0 -1 0.0
"C6" "C" 0 -1 0.0
"O6" "O" 0 -1 0.0
"N1" "NA" 0 -1 0.0

"H1" "H" 0 -1 0.0
"C2" "CA" 0 -1 0.0
"N2" "N2" 0 -1 0.0
"H21" "H" 0 -1 0.0
"H22" "H" 0 -1 0.0
"N3" "NC" 0 -1 0.0

"C4" "CB" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0

"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.RGN.unit.boundbox array dbl

-1.000000
0.0
0.0
0.0
0.0
!entry.RGN.unit.childsequence single int
2
!entry.RGN.unit.connect array int
0
0
!entry.RGN.unit.connectivity table int atom1x int atom2x int flags
1 2 1

2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 26 1
8 9 1
9 10 1
9 11 1
9 28 1
11 12 1
11 25 1
12 13 1
12 14 1
14 15 1
15 16 1
15 25 1
16 17 1
16 18 1

18 19 1
18 20 1
20 21 1
20 24 1
21 22 1
21 23 1
24 25 1
26 27 1
26 28 1
26 32 1
28 29 1
28 30 1
30 31 1
32 33 1
!entry.RGN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31

"R" 1 "A" 32
"R" 1 "A" 33
!entry.RGN.unit.name single str
"RGN"
!entry.RGN.unit.positions table dbl x dbl y dbl z

1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785

1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.590683 -0.679099 3.703095
2.813129 -1.180191 2.436673
2.923923 -0.505431 1.600717
2.866570 -2.487996 2.382915

2.666619 -2.884785 3.699987
2.618174 -4.183247 4.272741
2.745116 -5.274679 3.719964
2.392360 -4.124070 5.653142
2.340247 -4.991530 6.147911
2.235990 -2.964893 6.385439
2.027970 -3.123384 7.699672

1.962798 -3.996108 8.203861
1.903763 -2.280230 8.241672
2.283792 -1.749405 5.847662
2.502700 -1.789344 4.505990
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933

4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237
2.785632 3.721367 4.515693
3.677545 4.057868 4.629089
!entry.RGN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 33 0 0 0 0
!entry.RGN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RGN" 1 34 1 "n" 0
!entry.RGN.unit.residuesPdbSequenceNumber array int

0
!entry.RGN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RGN.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

!entry.RU.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000

"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900
"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900

"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500
"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800

"C1'" "CT" 0 1 131072 11 6 0.067400
"H1'" "H2" 0 1 131072 12 1 0.182400
"N1" "N*" 0 1 131072 13 7 0.041800
"C6" "CM" 0 1 131072 14 6 -0.112600

"H6" "H4" 0 1 131072 15 1 0.218800
"C5" "CM" 0 1 131072 16 6 -0.363500
"H5" "HA" 0 1 131072 17 1 0.181100
"C4" "C" 0 1 131072 18 6 0.595200

"O4" "O" 0 1 131072 19 8 -0.576100
"N3" "NA" 0 1 131072 20 7 -0.354900
"H3" "H" 0 1 131072 21 1 0.315400
"C2" "C" 0 1 131072 22 6 0.468700

"O2" "O" 0 1 131072 23 8 -0.547700
"C3'" "CT" 0 1 131072 24 6 0.202200
"H3'" "H1" 0 1 131072 25 1 0.061500
"C2'" "CT" 0 1 131072 26 6 0.067000

"H2'1" "H1" 0 1 131072 27 1 0.097200
"O2'" "OH" 0 1 131072 28 8 -0.613900
"HO'2" "HO" 0 1 131072 29 1 0.418600
"O3'" "OS" 0 1 131072 30 8 -0.524600

!entry.RU.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0
"O2P" "O2" 0 -1 0.0

"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0

"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0

"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0

"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OS" 0 -1 0.0

!entry.RU.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU.unit.childsequence single int
2
!entry.RU.unit.connect array int
1
30
!entry.RU.unit.connectivity table int atom1x int atom2x int flags

1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 24 1
10 11 1
11 12 1
11 13 1
11 26 1
13 14 1
13 22 1
14 15 1
14 16 1
16 17 1
16 18 1

18 19 1
18 20 1
20 21 1
20 22 1
22 23 1
24 25 1
24 26 1
24 30 1
26 27 1
26 28 1
28 29 1
!entry.RU.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1

"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7

"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14

"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20

"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26

"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
!entry.RU.unit.name single str

"RU"
!entry.RU.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538757 -0.306565 3.312624

4.316907 -0.672508 2.011175
4.145435 0.083636 1.259348
4.360319 -1.957589 1.633974
4.180695 -2.226406 0.593026
4.642747 -2.996990 2.589735
4.702951 -4.199184 2.336743
4.852825 -2.538493 3.874277

5.070434 -3.289149 4.634055
4.814724 -1.223882 4.292304
5.014668 -0.915001 5.455495
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136

6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
!entry.RU.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 30 0 0 0 0
!entry.RU.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RU" 1 31 1 "n" 0
!entry.RU.unit.residuesPdbSequenceNumber array int
0
!entry.RU.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
!entry.RU3.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"P" "P" 0 1 131072 1 15 1.166200
"O1P" "O2" 0 1 131072 2 8 -0.776000

"O2P" "O2" 0 1 131072 3 8 -0.776000
"O5'" "OS" 0 1 131072 4 8 -0.498900
"C5'" "CT" 0 1 131072 5 6 0.055800
"H5'1" "H1" 0 1 131072 6 1 0.067900

"H5'2" "H1" 0 1 131072 7 1 0.067900
"C4'" "CT" 0 1 131072 8 6 0.106500
"H4'" "H1" 0 1 131072 9 1 0.117400
"O4'" "OS" 0 1 131072 10 8 -0.354800

"C1'" "CT" 0 1 131072 11 6 0.067400
"H1'" "H2" 0 1 131072 12 1 0.182400
"N1" "N*" 0 1 131072 13 7 0.041800
"C6" "CM" 0 1 131072 14 6 -0.112600

"H6" "H4" 0 1 131072 15 1 0.218800
"C5" "CM" 0 1 131072 16 6 -0.363500
"H5" "HA" 0 1 131072 17 1 0.181100
"C4" "C" 0 1 131072 18 6 0.595200

"O4" "O" 0 1 131072 19 8 -0.576100
"N3" "NA" 0 1 131072 20 7 -0.354900
"H3" "H" 0 1 131072 21 1 0.315400
"C2" "C" 0 1 131072 22 6 0.468700

"O2" "O" 0 1 131072 23 8 -0.547700
"C3'" "CT" 0 1 131072 24 6 0.202200
"H3'" "H1" 0 1 131072 25 1 0.061500
"C2'" "CT" 0 1 131072 26 6 0.067000

"H2'1" "H1" 0 1 131072 27 1 0.097200
"O2'" "OH" 0 1 131072 28 8 -0.613900
"HO'2" "HO" 0 1 131072 29 1 0.418600
"O3'" "OH" 0 1 131072 30 8 -0.654100

"H3T" "HO" 0 1 131072 31 1 0.437600
!entry.RU3.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"P" "P" 0 -1 0.0
"O1P" "O2" 0 -1 0.0

"O2P" "O2" 0 -1 0.0
"O5'" "OS" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "C" 0 -1 0.0

"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0

"O3'" "OH" 0 -1 0.0
"H3T" "HO" 0 -1 0.0
!entry.RU3.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU3.unit.childsequence single int
2

!entry.RU3.unit.connect array int
1
0
!entry.RU3.unit.connectivity table int atom1x int atom2x int flags
1 2 1
1 3 1
1 4 1
4 5 1
5 6 1
5 7 1
5 8 1
8 9 1
8 10 1
8 24 1

10 11 1
11 12 1
11 13 1
11 26 1
13 14 1
13 22 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1
18 20 1
20 21 1
20 22 1
22 23 1
24 25 1
24 26 1
24 30 1
26 27 1

26 28 1
28 29 1
30 31 1
!entry.RU3.unit.hierarchy table str abovetype int abovex str
belowtype int belowx
"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2

"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6
"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9

"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13
"R" 1 "A" 14
"R" 1 "A" 15

"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19
"R" 1 "A" 20
"R" 1 "A" 21

"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25
"R" 1 "A" 26
"R" 1 "A" 27

"R" 1 "A" 28
"R" 1 "A" 29
"R" 1 "A" 30
"R" 1 "A" 31
!entry.RU3.unit.name single str

"RU3"
!entry.RU3.unit.positions table dbl x dbl y dbl z
2.314489 1.776673 -0.478436
1.933410 3.073374 -1.081549
3.156547 0.871841 -1.292450
2.994369 2.142475 0.922974
2.156035 2.551837 2.019887

1.452687 1.753841 2.257803
1.604968 3.450028 1.741178
3.008252 2.847921 3.243186
2.447118 3.477373 3.933851
3.228121 1.605168 3.977231
4.558614 1.150950 3.777548
5.072002 1.095281 4.737461
4.538757 -0.306565 3.312624

4.316907 -0.672508 2.011175
4.145435 0.083636 1.259348
4.360319 -1.957589 1.633974
4.180695 -2.226406 0.593026
4.642747 -2.996990 2.589735
4.702951 -4.199184 2.336743
4.852825 -2.538493 3.874277

5.070434 -3.289149 4.634055
4.814724 -1.223882 4.292304
5.014668 -0.915001 5.455495
4.415606 3.377827 2.961306
4.412072 3.941489 2.028369
5.230443 2.095696 2.779425
5.668211 2.081313 1.781301
6.272982 2.049941 3.757136

6.759278 1.235228 3.610987
5.029898 4.128649 3.998279
5.911984 4.450161 3.797897
!entry.RU3.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 31 0 0 0 0
!entry.RU3.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RU3" 1 32 1 "n" 0
!entry.RU3.unit.residuesPdbSequenceNumber array int
0
!entry.RU3.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU3.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RU5.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg
"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300

"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900
"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500

"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800
"C1'" "CT" 0 1 131072 9 6 0.067400
"H1'" "H2" 0 1 131072 10 1 0.182400

"N1" "N*" 0 1 131072 11 7 0.041800
"C6" "CM" 0 1 131072 12 6 -0.112600
"H6" "H4" 0 1 131072 13 1 0.218800
"C5" "CM" 0 1 131072 14 6 -0.363500

"H5" "HA" 0 1 131072 15 1 0.181100
"C4" "C" 0 1 131072 16 6 0.595200
"O4" "O" 0 1 131072 17 8 -0.576100
"N3" "NA" 0 1 131072 18 7 -0.354900

"H3" "H" 0 1 131072 19 1 0.315400
"C2" "C" 0 1 131072 20 6 0.468700
"O2" "O" 0 1 131072 21 8 -0.547700
"C3'" "CT" 0 1 131072 22 6 0.202200

"H3'" "H1" 0 1 131072 23 1 0.061500
"C2'" "CT" 0 1 131072 24 6 0.067000
"H2'1" "H1" 0 1 131072 25 1 0.097200
"O2'" "OH" 0 1 131072 26 8 -0.613900

"HO'2" "HO" 0 1 131072 27 1 0.418600
"O3'" "OS" 0 1 131072 28 8 -0.524600
!entry.RU5.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg

"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0
"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0

"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0
"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0

"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0
"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "C" 0 -1 0.0

"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0
"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0

"H3'" "H1" 0 -1 0.0
"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0

"O3'" "OS" 0 -1 0.0
!entry.RU5.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU5.unit.childsequence single int
2
!entry.RU5.unit.connect array int
0

28
!entry.RU5.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 22 1
8 9 1
9 10 1
9 11 1
9 24 1
11 12 1
11 20 1

12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1
18 20 1
20 21 1
22 23 1
22 24 1
22 28 1
24 25 1
24 26 1
26 27 1
!entry.RU5.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
!entry.RU5.unit.name single str
"RU5"
!entry.RU5.unit.positions table dbl x dbl y dbl z

1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312
1.165852 2.413322 3.114690
0.391898 3.029893 3.571785

1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.632954 -0.717027 3.703400
2.875704 -1.078951 2.404560
2.959033 -0.321303 1.639428
3.067013 -2.361006 2.064952

3.258726 -2.626647 1.025346
3.022940 -3.401293 3.059668
3.186163 -4.600921 2.842522
2.773361 -2.946917 4.338595
2.730570 -3.698396 5.126977
2.572586 -1.635486 4.718382
2.357491 -1.330167 5.879810

2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237
2.785632 3.721367 4.515693
!entry.RU5.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x

1 28 0 0 0 0
!entry.RU5.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx
"RU5" 1 29 1 "n" 0
!entry.RU5.unit.residuesPdbSequenceNumber array int

0
!entry.RU5.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RU5.unit.velocities table dbl x dbl y dbl z
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
!entry.RUN.unit.atoms table str name str type int typex int resx
int flags int seq int elmnt dbl chg

"H5T" "HO" 0 1 131072 1 1 0.429500
"O5'" "OH" 0 1 131072 2 8 -0.622300
"C5'" "CT" 0 1 131072 3 6 0.055800
"H5'1" "H1" 0 1 131072 4 1 0.067900

"H5'2" "H1" 0 1 131072 5 1 0.067900
"C4'" "CT" 0 1 131072 6 6 0.106500
"H4'" "H1" 0 1 131072 7 1 0.117400
"O4'" "OS" 0 1 131072 8 8 -0.354800

"C1'" "CT" 0 1 131072 9 6 0.067400
"H1'" "H2" 0 1 131072 10 1 0.182400
"N1" "N*" 0 1 131072 11 7 0.041800
"C6" "CM" 0 1 131072 12 6 -0.112600

"H6" "H4" 0 1 131072 13 1 0.218800
"C5" "CM" 0 1 131072 14 6 -0.363500
"H5" "HA" 0 1 131072 15 1 0.181100
"C4" "C" 0 1 131072 16 6 0.595200

"O4" "O" 0 1 131072 17 8 -0.576100
"N3" "NA" 0 1 131072 18 7 -0.354900
"H3" "H" 0 1 131072 19 1 0.315400
"C2" "C" 0 1 131072 20 6 0.468700

"O2" "O" 0 1 131072 21 8 -0.547700
"C3'" "CT" 0 1 131072 22 6 0.202200
"H3'" "H1" 0 1 131072 23 1 0.061500
"C2'" "CT" 0 1 131072 24 6 0.067000

"H2'1" "H1" 0 1 131072 25 1 0.097200
"O2'" "OH" 0 1 131072 26 8 -0.613900
"HO'2" "HO" 0 1 131072 27 1 0.418600
"O3'" "OH" 0 1 131072 28 8 -0.654100

"H3T" "HO" 0 1 131072 29 1 0.437600
!entry.RUN.unit.atomspertinfo table str pname str ptype int ptypex
int pelmnt dbl pchg
"H5T" "HO" 0 -1 0.0
"O5'" "OH" 0 -1 0.0

"C5'" "CT" 0 -1 0.0
"H5'1" "H1" 0 -1 0.0
"H5'2" "H1" 0 -1 0.0
"C4'" "CT" 0 -1 0.0
"H4'" "H1" 0 -1 0.0

"O4'" "OS" 0 -1 0.0
"C1'" "CT" 0 -1 0.0
"H1'" "H2" 0 -1 0.0
"N1" "N*" 0 -1 0.0
"C6" "CM" 0 -1 0.0

"H6" "H4" 0 -1 0.0
"C5" "CM" 0 -1 0.0
"H5" "HA" 0 -1 0.0
"C4" "C" 0 -1 0.0
"O4" "O" 0 -1 0.0
"N3" "NA" 0 -1 0.0

"H3" "H" 0 -1 0.0
"C2" "C" 0 -1 0.0
"O2" "O" 0 -1 0.0
"C3'" "CT" 0 -1 0.0
"H3'" "H1" 0 -1 0.0

"C2'" "CT" 0 -1 0.0
"H2'1" "H1" 0 -1 0.0
"O2'" "OH" 0 -1 0.0
"HO'2" "HO" 0 -1 0.0
"O3'" "OH" 0 -1 0.0

"H3T" "HO" 0 -1 0.0
!entry.RUN.unit.boundbox array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RUN.unit.childsequence single int
2
!entry.RUN.unit.connect array int
0

0
!entry.RUN.unit.connectivity table int atom1x int atom2x int flags
1 2 1
2 3 1
3 4 1
3 5 1
3 6 1
6 7 1
6 8 1
6 22 1
8 9 1
9 10 1
9 11 1
9 24 1
11 12 1
11 20 1

12 13 1
12 14 1
14 15 1
14 16 1
16 17 1
16 18 1
18 19 1
18 20 1
20 21 1
22 23 1
22 24 1
22 28 1
24 25 1
24 26 1
26 27 1
28 29 1
!entry.RUN.unit.hierarchy table str abovetype int abovex str
belowtype int belowx

"U" 0 "R" 1
"R" 1 "A" 1
"R" 1 "A" 2
"R" 1 "A" 3
"R" 1 "A" 4
"R" 1 "A" 5
"R" 1 "A" 6

"R" 1 "A" 7
"R" 1 "A" 8
"R" 1 "A" 9
"R" 1 "A" 10
"R" 1 "A" 11
"R" 1 "A" 12
"R" 1 "A" 13

"R" 1 "A" 14
"R" 1 "A" 15
"R" 1 "A" 16
"R" 1 "A" 17
"R" 1 "A" 18
"R" 1 "A" 19

"R" 1 "A" 20
"R" 1 "A" 21
"R" 1 "A" 22
"R" 1 "A" 23
"R" 1 "A" 24
"R" 1 "A" 25

"R" 1 "A" 26
"R" 1 "A" 27
"R" 1 "A" 28
"R" 1 "A" 29
!entry.RUN.unit.name single str

"RUN"
!entry.RUN.unit.positions table dbl x dbl y dbl z
1.866026 1.500000 -1.166025E-06
1.958076 1.721055 0.929655
0.788438 2.110876 1.673689
0.059609 1.300555 1.656698
0.350939 3.001862 1.223312

1.165852 2.413322 3.114690
0.391898 3.029893 3.571785
1.142228 1.169997 3.879664
2.468203 0.737932 4.147079
2.623230 0.684850 5.224692
2.632954 -0.717027 3.703400
2.875704 -1.078951 2.404560
2.959033 -0.321303 1.639428

3.067013 -2.361006 2.064952
3.258726 -2.626647 1.025346
3.022940 -3.401293 3.059668
3.186163 -4.600921 2.842522
2.773361 -2.946917 4.338595
2.730570 -3.698396 5.126977
2.572586 -1.635486 4.718382

2.357491 -1.330167 5.879810
2.575663 2.966923 3.331156
2.881940 3.535798 2.453275
3.424930 1.698842 3.438933
4.177812 1.697074 2.650729
4.070875 1.663901 4.714250
4.591407 0.857795 4.743237
2.785632 3.721367 4.515693

3.677545 4.057868 4.629089
!entry.RUN.unit.residueconnect table int c1x int c2x int c3x int
c4x int c5x int c6x
1 29 0 0 0 0
!entry.RUN.unit.residues table str name int seq int childseq int
startatomx str restype int imagingx

"RUN" 1 30 1 "n" 0
!entry.RUN.unit.residuesPdbSequenceNumber array int
0
!entry.RUN.unit.solventcap array dbl
-1.000000
0.0
0.0
0.0
0.0
!entry.RUN.unit.velocities table dbl x dbl y dbl z

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0

0.0 0.0 0.0

-- 
-- - -
HK
-------------------------------------------------------
Kevin Eduard Hauser
The Department of Chemistry
Stony Brook University
Stony Brook, New York 11794
(631) 913.3194
(561) 635.1848
84hauser.gmail.com
-------------------------------------------------------
_______________________________________________
AMBER mailing list
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http://lists.ambermd.org/mailman/listinfo/amber

Received on Wed Jun 23 2010 - 06:00:24 PDT