Re: [AMBER] parallel compiling failure of Amber 11

From: Gustavo Seabra <>
Date: Tue, 22 Jun 2010 05:54:42 -0300

Hi there,

You are asking for a compilation using Intel compilers:
> [root.localhost src]# ./configure -mpi intel

> mpif90 -show
> gfortran -I/usr/local/include -pthread -I/usr/local/lib
> -L/usr/local/lib -lmpi_f90 -lmpi_f77 -lmpi -lopen-rte -lopen-pal -ldl
> -Wl,--export-dynamic -lnsl -lutil -lm -ldl
> mpicc
> gcc -I/usr/local/include -pthread -L/usr/local/lib -lmpi -lopen-rte
> -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl

Shows that your mpi implementation was compiled using gnu compilers.
You should consider either:
1. Recompile your MPI implementation with Intel compilers, or
2. (If option 1 isn't possible for you) Use gnu compilers to compile Amber.

Gustavo Seabra
Professor Adjunto
Departamento de Química Fundamental
Universidade Federal de Pernambuco
Fone: +55-81-2126-7417

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Received on Tue Jun 22 2010 - 02:00:03 PDT
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