[AMBER] periodic images of truc. octahedron in vmd

From: Paul Brandt <brandt.j.gene.com>
Date: Mon, 21 Jun 2010 13:52:06 -0700



This is arguably a VMD question, but I'll give it a shot here:


Does anyone know, does VMD correctly display the periodic images of a
truncated octahedral simulation cell created with leap? I see empty space
in between the cells. This isn't right is it?


I want to check to see whether my molecule is possibly interacting with an
image of itself. Is there an alternative to VMD for visualizing the
periodic images?





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Received on Mon Jun 21 2010 - 14:00:05 PDT
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