Hi,
I think you have to put your amber10 package in your home directory and
compile it here. Because here you have all the permissions. Don't put the
amber10 package under /software. Then give the proper path and test it. I am
confident that you will not get any error message.
Thanks and regards.
---------------------------------------------------------------------
Indrajit Deb
Kolkata. India.
Ph. +919239202278
On Wed, Jun 16, 2010 at 10:28 PM, case <case.biomaps.rutgers.edu> wrote:
> On Wed, Jun 16, 2010, Devlina Chakravarty wrote:
> >
> > make test.parallel.QMMM < /dev/null
> > export TESTsander=/software/amber10/
> > exe/sander.MPI; make test.sander.QMMM
> > make[1]: Entering directory `/software/amber10/test'
> > cd qmmm2/xcrd_build_test/ && ./Run.oct_nma_imaged
> > mdin: Permission denied.
> > touch: cannot touch `dummy': Permission denied
>
> It looks like you don't have write permissions in the directory you are
> running the test cases. You will need to fix this, perhaps by copying the
> test directory to someplace you have write permission.
>
> ....dac
>
>
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Received on Thu Jun 17 2010 - 01:00:03 PDT
