[AMBER] Rdf and density

From: John S <s.john634.gmail.com>
Date: Wed, 16 Jun 2010 01:55:37 -0400

While calculating rdf using ptraj , the default value is taken as per
density of water .
Are the units in (number of particles/Angstorm^3)

According to the equation used hereby , does this density represent the
number density of atoms in the system as a whole .

I get two columns of data in my standard_xmgr file , what does the second
column represent .

I appreciate your feedback.

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Received on Tue Jun 15 2010 - 23:00:03 PDT
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