Dear amber users:
I want to simulate a protein and a ligand, there should be four hydrogen bonds between them, but in my docked structure, the internuclear distances were too large for hydrogen bonds, is there a way to get my expected structuer? for example, if I can use distance restraints in the md simulation to come to this end?
2010-06-02
qiaoyan
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Received on Wed Jun 02 2010 - 06:30:04 PDT