It's fixed, I downgraded from Ubuntu 10.04 back down to 9.10. Problem solved
----- Original Message -----
From: "case" <case.biomaps.rutgers.edu>
To: "AMBER Mailing List" <amber.ambermd.org>
Sent: Tuesday, May 25, 2010 3:48:14 PM GMT -05:00 US/Canada Eastern
Subject: Re: [AMBER] Setting Atom Types
On Tue, May 25, 2010, Alex Boncheff wrote:
>
> > x = sequence { ROH 0GB }
> > desc x
> UNIT name: ROH
> Head atom: .R<ROH 1>.A<HO1 1>
> Tail atom: .R<0GB 2>.A<C2 19>
> Contents:
> R<ROH 1>
> R<0GB 2>
> > set x head x.2.O2
> The value must be of the type: Atom
I don't see this message:
> set x head x.2.O2
> desc x
UNIT name: ROH
Head atom: .R<0GB 2>.A<O2 21>
Tail atom: .R<0GB 2>.A<C2 19>
Contents:
R<ROH 1>
R<0GB 2>
...showing that the head atom has indeed been changed.
So: what version of AmberTools? Which OS and compiler? What arguments
did you give to configure, and what does "uname -a" report?
....dac
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--
Alex Boncheff
MSc. Candidate
Department of Chemistry
University of Guelph
Guelph, ON, Canada
N1G 2W1
Office: MacNaughton 233
T: 519-824-4120 x 58111
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Received on Tue May 25 2010 - 22:30:03 PDT
