[AMBER] unable to view grid file of ptraj

From: Hyma vathi <hymavathi.niper.gmail.com>
Date: Tue, 25 May 2010 23:42:41 +0900

Hi All,

May be this is a very basic question but I am having a problem anyone who
can help me it would be great
I generated a grid file for water density using ptraj using the following
lines:

trajin combine_traj.binpos
center :1-317 mass origin
image origin center
rms first mass :1-317
grid wat.dat 100 0.5 100 0.5 100 0.5 :WAT.O

But when I try to view it in Chimera/VMD I am unable to do so Can anyone
point out where the error is and how to rectify it Thank you in advance.

-- 
Hymavathi,
MS(Pharm),
Center for Pharmacoinformatics,
National Institute of Pharmaceutical Education and Research(NIPER),
Mohali,
INDIA.
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Received on Tue May 25 2010 - 08:00:08 PDT
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