[AMBER] Ambertools 1.4 installation cygwin

From: Steve Henderson <toma0052.gmail.com>
Date: Wed, 19 May 2010 23:34:38 -0400

Hello,
     I am trying to install Ambertools 1.4 under cygwin. I have been
following the installation described here:

<http://ambermd.org/mswindows.html>

When running ./configure -cygwin gnu I get the warning message:

Warning: the X11 libraries are not in the usual location !
    To search for them try the command: locate libXt
    On new Fedora OS's install the libXt-devel libXext-devel
    libX11-devel libICE-devel libSM-devel packages.
    On old Fedora OS's install the xorg-x11-devel package.
    On RedHat OS's install the XFree86-devel package.
    On Ubuntu OS's install the xorg-dev package.
    For the moment Amber will be configured not to build XLEaP.

Everything else checks out okay, but if I proceed to make install, the
process terminates with:

mkdir .libs/libnetcdff.lax/libnetcdff90.a
(cd .libs/libnetcdff.lax/libnetcdff90.a && ar x
/home/mtomas/Amber_Tools/amber11/AmberTools/src/netcdf/src/fortran/../f90/.libs/libnetcdff90.a)
libtool: link: ERROR: object name conflicts:
.libs/libnetcdff.lax/libnetcdff90.a//home/mtomas/Amber_Tools/amber11/AmberTools/src/netcdf/src/fortran/../f90/.libs/libnetcdff90.a
make[2]: *** [libnetcdff.la] Error 1
make[2]: Leaving directory
`/home/mtomas/Amber_Tools/amber11/AmberTools/src/netcdf/src/fortran'
make[1]: *** [install-recursive] Error 1
make[1]: Leaving directory
`/home/mtomas/Amber_Tools/amber11/AmberTools/src/netcdf/src'
make: *** [../netcdf/lib/libnetcdf.a] Error 2

I am assuming that these two errors are related, but I'm not sure. Can
anyone shed light on what may be wrong with my system?

Thank you,
Mike
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed May 19 2010 - 21:00:03 PDT
Custom Search