it comes with amber and you could do it using xleap/tleap as you do with water.
np
---------------------------------------
Necmettin Pirinccioglu
Department of Chemistry
University of Dicle
e-mail. pirincn at dicle dot edu dot tr
phone. +90 (0412) 2488550 (ext. 3055)
----------------------------------------------
> -----Original Message-----
> From: ashutosh shandilya <izerokelvin.gmail.com>
> To: AMBER Mailing List <AMBER.ambermd.org>
> Date: 18-05-2010 10:19
> Subject: [AMBER] Chloroform solvent model
>
> Hi
> I want to do simulation of my drug molecule in chloroform solvent.how can I
> make the topology and coordinate file .I have done it in vacuum and water.So
> I would be grateful if someone can say the procedure.
> Thanks and regards
> Ashutosh Shandilya
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Received on Tue May 18 2010 - 02:00:03 PDT
