Re: [AMBER] amber10 installation error in linux (openmpi error)

From: Sangita Kachhap <sangita.imtech.res.in>
Date: Tue, 18 May 2010 11:40:33 +0530 (IST)

Thank you for reply according to you now i am configuring openmpi with:

./configure F77=ifort FC=ifort CFLAGS=-m64 CPPFLAGS=-m64 CXXFLAGS=-m64
CXXCPPFLAGS=-m64 FFLAGS=-m64 FCFLAGS=-m64 --prefix=/home/sangita/openmpi64
--enable-mpi-f77 --enable-mpi-f90 --enable-mpi-cxx --enable-mpi-CC
--enable-mpi-run --enable-mpi-exec --with-wrapper-cflags=-m64
--with-warapper-cppflags=-m64 --with-wrapper-cxxflags=-m64
--with-wrapper-cxxcppflags=-m64 --with-wrapper-fflags=-m64
--with-wrapper-fcflags=-m64

It has configured openmpi for mpi-f77 but showing error for mpi-f90:

ifort -I../../../include -I../../../include -I. -m64 -c -o mpi.o mpi.f90
mpi.f90(21): error #7013: This module file was not generated by any release of
this compiler. [MPI_KINDS]
  use mpi_kinds
------^
mpi-f90-interfaces.h(18): error #6683: A kind type parameter must be a
compile-time constant. [MPI_INTEGER1_KIND]
  logical(kind=MPI_INTEGER1_KIND), intent(in) :: origin_addr
---------------^









> On May 17, 2010, at 11:03 PM, Sangita Kachhap wrote:
>
>>
>> Hello,
>>
>> I am compiling amber10.I have compiled it serial successfully using fort
>> compiler but when I am compiling parallel using openmpi and fort i am getting
>> following error.
>>
>>
>> make[1]: Entering directory `/home/sangita/amber10/src/sander'
>> ./checkparconf
>> cpp -traditional -I/home/sangita/openmpi64/include -P -DBINTRAJ -DMPI
>> constants.f > _constants.f
>> /home/sangita/openmpi64/bin/mpif90 -c -w95 -vec_report0 -mp1 -ip -O3 -axWP
>> -FR
>> -o constants.o _constants.f
>>
>
> Another thing I am wondering about is whether you configured openmpi with the
> correct environmental variables, such as:
> F77=ifort FC=ifort ./configure
>
>> FORTRAN: unrecognized option '-w95'
>> FORTRAN: unrecognized option '-vex_report0'
>> f951: error: unrecognized command line option "-mp1"
>> f951: error: unrecognized command line option "-ax WP"
>> make[1]: *** [constants.o] Error 1
>> make[1]: Leaving directory `/home/sangria/amber10/SEC/sander'
>> make: *** [parallel] Error 2
>>
>> I am not getting where is the problem so can anybody please help me.
>>
>>
>> With regards
>>
>> Sangita Kachhap
>> JRF
>> BIC,IMTECH
>> CHANDIGARH
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>


Sangita Kachhap
JRF
BIC,IMTECH
CHANDIGARH

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon May 17 2010 - 23:30:03 PDT
Custom Search