[AMBER] Query on the trajectory output in PDB format

From: nicholus bhattacharjee <nicholusbhattacharjee.gmail.com>
Date: Thu, 13 May 2010 18:45:17 +0530

Dear community,
                         After my simulation is over I am extracting the
snapshots from .mdcrd file in PDB format. I am using the coordinates from
each snapshot for farther analysis. Now is it necessary to do a RMS fit
before extracting the snapshots by trajout command. Thank you in advance for
your useful suggestions. 

-- 
Nicholus Bhattacharjee
PhD Scholar
Department of Chemistry
University of Delhi
Delhi-110007 (INDIA)
Phone: 9873098743(M)
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Received on Thu May 13 2010 - 06:30:03 PDT
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