RE: [AMBER] installation of amber

From: Ross Walker <ross.rosswalker.co.uk>
Date: Sun, 9 May 2010 19:30:50 -0700

Hi Qiaoyan,

Are you certain you did a 'make clean' and 'make -f Makefile_at clean'
before you did the make? The compiler here is gcc but the error suggests
things may have been previously built using the Intel compiler. I suggest
trying the two make clean's and then rerun configure and configure_at and
try again.

All the best
Ross

> -----Original Message-----
> From: amber-bounces.ambermd.org [mailto:amber-bounces.ambermd.org] On
> Behalf Of qiaoyan
> Sent: Sunday, May 09, 2010 6:44 PM
> To: AMBER
> Subject: [AMBER] installation of amber
>
> Dear amber users:
> During the installation of Amber10 I faced a problem when I "make -
> f Makefile_at", the errors are as follows:
> mkdir /home/wangyi/amber10/bin /home/wangyi/amber10/lib
> /home/wangyi/amber10/include
> mkdir: cannot create directory `/home/wangyi/amber10/bin': File exists
> mkdir: cannot create directory `/home/wangyi/amber10/lib': File exists
> mkdir: cannot create directory `/home/wangyi/amber10/include': File
> exists
> make: [install] Error 1 (ignored)
> (cd ucpp-1.3 && make install )
> make[1]: Entering directory `/home/wangyi/amber10/src/ucpp-1.3'
> Makefile:35: warning: overriding commands for target `.c.o'
> ../config.h:99: warning: ignoring old commands for target `.c.o'
> gcc -o ucpp mem.o nhash.o cpp.o lexer.o assert.o macro.o eval.o
> mem.o: In function `sdup':
> mem.c:(.text+0x42): undefined reference to `_intel_fast_memcpy'
> mem.o: In function `incmem':
> mem.c:(.text+0x9c): undefined reference to `_intel_fast_memcpy'
> nhash.o: In function `HTT2_put':
> nhash.c:(.text+0xb57): undefined reference to `_intel_fast_memcpy'
> nhash.c:(.text+0xc24): undefined reference to `_intel_fast_memcpy'
> nhash.c:(.text+0xca6): undefined reference to `_intel_fast_memcpy'
> nhash.o:nhash.c:(.text+0xe8b): more undefined references to
> `_intel_fast_memcpy' follow
> cpp.o: In function `main':
> cpp.c:(.text+0x1c): undefined reference to `__intel_new_proc_init'
> cpp.o: In function `handle_cpp':
> cpp.c:(.text+0x1a2a): undefined reference to `_intel_fast_memcpy'
> cpp.o: In function `handle_include':
> cpp.c:(.text+0x2711): undefined reference to `_intel_fast_memcpy'
> cpp.c:(.text+0x2729): undefined reference to `_intel_fast_memcpy'
> cpp.c:(.text+0x2d7e): undefined reference to `_intel_fast_memcpy'
> cpp.c:(.text+0x2def): undefined reference to `_intel_fast_memcpy'
> cpp.o:cpp.c:(.text+0x2fe0): more undefined references to
> `_intel_fast_memcpy' follow
> collect2: ld returned 1 exit status
> make[1]: *** [ucpp] Error 1
> make[1]: Leaving directory `/home/wangyi/amber10/src/ucpp-1.3'
> make: *** [install] Error 2
>
> I can't understand why this the problem. Please give me some
> directions, thank you!
>
> 2010-05-10
>
>
>
> qiaoyan
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber


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Received on Sun May 09 2010 - 20:00:03 PDT
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