Re: Re: [AMBER] how to get decomposed energies of every snapshot

From: pxq <pangxueqintea.yahoo.com.cn>
Date: Fri, 7 May 2010 08:30:26 +0800

I am using Amber10

And not sure how to change mm_pbsa_statistics.pm in mm_pbsa

Thanks

Xueqin

        

======= 2010-05-06 22:07:35 ÄúÔÚÀ´ÐÅÖÐдµÀ£º=======

>this is much easier in amber11 than in amber10. which amber version
>are you using?
>
>
>
>2010/5/6 pxq <pangxueqintea.yahoo.com.cn>:
>> Hello everyone,
>>
>> I am calculating binding free energy by mm-gbsa with dc=1. And can I get the decomposed free energies (such as ELE VDW) for every snapshots by make same change of mm_pbsa_statistics.pm and how to do so ?
>>
>> Thanks every much for your kind help
>>
>>
>>
>> Xueqin
>>
>>
>> =======================================================================================
>> Pang Xueqin
>> State Key Laboratory of Molecular Reaction Dynamics
>> Dalian Institute of Chemical Physics
>> Chinese Academy of Sciences.
>> Tel: 0411-84379352 Fax: 0411-84675584
>> =======================================================================================
>>
>> __________________________________________________
>> ¸Ï¿ì×¢²áÑÅ»¢³¬´óÈÝÁ¿Ãâ·ÑÓÊÏä?
>> http://cn.mail.yahoo.com
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>_______________________________________________
>AMBER mailing list
>AMBER.ambermd.org
>http://lists.ambermd.org/mailman/listinfo/amber
>

= = = = = = = = = = = = = = = = = = = =
                        

¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡ÖÂ
Àñ£¡
 
                                 
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡pxq
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡pangxueqintea.yahoo.com.cn
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡2010-05-07

†Ûiÿ÷'™¨¥É¨h¡Ê&

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu May 06 2010 - 18:00:03 PDT
Custom Search