Re: [AMBER] Installation of Amber10

From: case <case.biomaps.rutgers.edu>
Date: Thu, 6 May 2010 08:47:34 -0400

On Thu, May 06, 2010, jaya c.jose wrote:
>
> During the installation of Amber10 I faced a problem while installing the
> PMEMD.I compiled it successfully but when I gave the command 'make install'
> it prompts.
>
>
> make[1]: Entering directory
> `/storage/home/nsengupta/AMBER/amber10/src/pmemd/src'
> /lib/cpp -traditional -P
> -I/opt/intel/mkl/10.0.3.020/lib/em64t//include-DPUBFFT -DMPI
                                            ^^^^^^^

There should be a space before the "-DPUBFFT" part -- is that just a cut and
paste error in the email, or is the space actually missing?

What is the value of MPI_INCLUDE in your config.h file? Is there an "mpif.h"
file in the directory that this points to?

You say it "compiled succssfully" -- how do you know this? What comannds did
you give prior to the "make install" command?

....dac


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Received on Thu May 06 2010 - 06:00:05 PDT
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