Re: [AMBER] Periodic Boundary in AMBER(PMEMD) GPU Acceleration support ?

From: Hiromasa WATANABE <hi-watanabe.hpc.co.jp>
Date: Fri, 26 Feb 2010 15:40:26 +0900

Hi Ross,

Thanks for your rapid reply.
I'm looking forward to the PME working version, your doc and benchmarks!

Thanks,

> Hi Hiromasa,
>
> Right now the patch for AMBER 10 provides on GB support. Full GPU support
> (NVIDIA) including GB and PME will be available as part of the upcoming
> AMBER 11 release. I will be putting together documentation and benchmarks
> for both current Tesla and new Fermi cards in the next month or so. We have
> PME working in our development version and are in the final phases of
> testing and validation.
>
> Stay tuned.
>
> All the best
> Ross
>
>> -----Original Message-----
>> From: amber-bounces.ambermd.org [mailto:amber-bounces.ambermd.org] On
>> Behalf Of Hiromasa WATANABE
>> Sent: Thursday, February 25, 2010 7:06 PM
>> To: amber.ambermd.org
>> Cc: hi-watanabe.hpc.co.jp
>> Subject: [AMBER] Periodic Boundary in AMBER(PMEMD) GPU Acceleration
>> support ?
>>
>> Hi Amber fans,
>>
>> I see the great page, http://ambermd.org/gpus/ ,
>> in the Provisional Benchmarks (TRPCage, Myoglobin
>> and Nucleosome), ntb=0 is set.
>>
>> In the AMBER(PMEMD) GPU Acceleration support,
>> is periodic boundary computation supported ?
>> If yes, how would be it's performance ?
>>
>> thanks in advance,
>>
>> --
>> Hiromasa WATANABE
>> Research Development Department, HPC SYSTEMS Inc.
>> Head office: Time 24 Building 10F North,
>> 2-4-32 Aomi, Koutou-ku, Tokyo, Japan 135-8073.
>> Email: hi-watanabe.hpc.co.jp
>> www.hpc.co.jp
>>
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>
>
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-- 
Hiromasa WATANABE
Research Development Department, HPC SYSTEMS Inc.
Head office: Time 24 Building 10F North,
   2-4-32 Aomi, Koutou-ku, Tokyo, Japan 135-8073.
Email: hi-watanabe.hpc.co.jp
www.hpc.co.jp
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Received on Thu Feb 25 2010 - 23:00:03 PST
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