Re: [AMBER] AmberTools1.3 installation error

From: case <case.biomaps.rutgers.edu>
Date: Tue, 23 Feb 2010 08:01:37 -0500

On Tue, Feb 23, 2010, Anna Dejardin wrote:

> cp -p sleap /homes/acd/amber11/bin
> cp: preserving permissions for `/homes/acd/amber11/bin/sleap': Operation
> not supported
> cp: preserving ACL for `/homes/acd/amber11/bin/sleap': Operation not
> supported
> make[2]: *** [install] Error 1

I guess that something weird is happening with the "enterprise" version of
of Linux here. You could try playing around with the "cp -p" in various
guises to see how permissions are working on your system. But that might
be hard if you are "painfully new to all this."

Go to amber11/src/gleap/leapsrc, and change line 118 in the Makefile from

     cp -p $(TARGET) $(BINDIR)
to
     -cp -p $(TARGET) $(BINDIR)

That will cause make to ignore the error listed above.

...good luck...dac


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Received on Tue Feb 23 2010 - 05:30:02 PST
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